RNA id: AMCG00010701



Basic Information


Item Value
RNA id AMCG00010701
length 726
RNA type mRNA
GC content 0.60
exon number 5
gene id AMCG00010701
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 39499001 ~ 39505758 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATTCAACCCAGGCGAACGCTGAGGAAGTTGCCCCTCCAAGCCAACTTCTACCCGATGACGACCATGGCGTACCTTCAGGATAACCATGTCCGCATGACCCTGCATTCGGCGCAGTCTTTGGGGGTGTCCAGTCTGAAGCCTGgccAGCTAGAGGTCATCATGGACCGGCGCCTCATGCAGGACGACAACCGCGGGCTGGGCCAGGGTGTGCAGGACAACAAGGTCACGGCCAACCTGTTCCGCGTGCTCCTGGAGAGACGGGCAGAACCGAGAGAGGGAGACGACAGCCAGCCGCTGAGCTTCCCCTCCCTGCTGAGCCACATCACCTCCCTTTACCTGAACCACCCCGTCCTCCCCATGGCCGTCAGCCTCCACTTCGGGGCCGTGTCACTGTCGACCTTCAGCCCCCTGCTCTCCTCGCTGCCTTGTGACATCCATGTGGTCAACCTCCGCACCATACAGGCCCAGGAGGGAGTCGGTCCATCGGATGAAGCCGCCTTGATTCTGCACCGGAAGGGATTCGACTGTGGATTTGACACTAAAAACACTGGGCTGCTGTGCTCGACCACTCACGGCAAGGTAATCTGCCTGGAGAGAGAGATGAAAGTGCAGAGCCTCACCCCCGTGTCTTTATCTCTGATGCACACCCCCGATCAGGGCGGGAACGCAGACGAGATCCAGCTGAAGCCGATGGAGATCAGCACGTACCGGATCCGGCTGAGATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU103022 lncRNA upstream 124938 39371698 ~ 39374063 (+) True G82548
TU103017 lncRNA upstream 191847 39306929 ~ 39307154 (+) True G82545
TU102992 lncRNA upstream 250376 39242857 ~ 39248625 (+) True AMCG00010695
TU102993 lncRNA upstream 260513 39235825 ~ 39238488 (+) True G82523
TU102991 lncRNA upstream 278794 39219919 ~ 39220207 (+) True G82521
TU103043 lncRNA downstream 725 39506483 ~ 39509252 (+) True G82561
TU103121 lncRNA downstream 40783 39546541 ~ 39546879 (+) True G82620
TU103138 lncRNA downstream 172715 39678473 ~ 39695118 (+) True G82637
TU103139 lncRNA downstream 191795 39697553 ~ 39697774 (+) True G82638
TU103140 lncRNA downstream 193403 39699161 ~ 39699367 (+) True G82639
AMCG00010702 mRNA upstream 10027 39479277 ~ 39488974 (+) True AMCG00010702
AMCG00010700 mRNA upstream 35507 39456337 ~ 39463494 (+) True AMCG00010700
AMCG00010706 mRNA upstream 54926 39436038 ~ 39444075 (+) True AMCG00010706
AMCG00010705 mRNA upstream 63776 39412516 ~ 39435225 (+) True AMCG00010705
AMCG00010696 mRNA upstream 165165 39313105 ~ 39333836 (+) True AMCG00010696
AMCG00010703 mRNA downstream 43764 39549522 ~ 39558213 (+) True AMCG00010703
AMCG00010707 mRNA downstream 69846 39575604 ~ 39593245 (+) True AMCG00010707
AMCG00010708 mRNA downstream 109378 39615136 ~ 39655340 (+) True AMCG00010708
AMCG00010715 mRNA downstream 297544 39803302 ~ 39803661 (+) True AMCG00010715
AMCG00010712 mRNA downstream 307674 39813432 ~ 39834594 (+) True AMCG00010712
TU102818 other upstream 708233 38782079 ~ 38790768 (+) False AMCG00010687
TU102819 other upstream 708233 38782079 ~ 38790768 (+) False AMCG00010687
TU102820 other upstream 708233 38782079 ~ 38790768 (+) True AMCG00010687
TU102822 other upstream 708233 38782079 ~ 38790768 (+) False AMCG00010687
TU102794 other upstream 858876 38637503 ~ 38640125 (+) True AMCG00010681
TU103177 other downstream 343188 39848946 ~ 39849369 (+) True G82671
TU103237 other downstream 541328 40047086 ~ 40049815 (+) True G82723
TU103450 other downstream 1046999 40552757 ~ 40554854 (+) False AMCG00010735
TU103506 other downstream 1182759 40688517 ~ 40690850 (+) True G82939
TU103580 other downstream 1421421 40927179 ~ 40930030 (+) True G83001

Expression Profile