RNA id: TU103450



Basic Information


Item Value
RNA id TU103450
length 608
RNA type TUCP
GC content 0.67
exon number 2
gene id AMCG00010735
representative False

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 40552367 ~ 40566357 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCTCCGCTGACATTTTGAAACCCGCGCAGCCGAGCCGAGCGGACGCTGCTCTCCGCCGCGACCCGCCGTTTGCTGCCCGTGTGAGCCGGCAAGCGCCGCAGACTATGATGCTGATTAAGCCGGGCACGTAAAATAAACCACATCAGCGCCCAGGTTCTCCTGTCCAGCCCGGTCCAGCCAGTGTCCCCCAGTGCTCTATGCTCTGACACCTGGGGGAGGCCTTCGCACTCAACTGACATGAAGATGGCCGACACGGAGAAGACGGAAGAGCTTGTGGACTCCGAGACGCCCCCCGAGGCCCCTGCGGACCGGCCggcggcgggggggggggcagtggcaCGGGAGGACGAGCCCCTGAAGACTGAGACCTCCCCCTCGGAGAAGGAGGGAGACAGCCCCCTGCAGACGGACCCCAGCCTGATGTCCTCCATGCCCTGCCTGCTCATGGAGCTGCGCCGGGATTCCCCCGAGTCGCAGAGAGCGTCCACGGAGAGCGAGAAGCCGCCGTCCAACCGCACCTACGAGAGCGACTCCTCCAACCCCTGCCTGCTGTCGCCCTCCTCCAGCGGACACCTGGCCGACTCGGACACGCTGTCCTCGGGGGAGGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU103405 lncRNA upstream 243768 40308755 ~ 40308989 (+) True G82854
TU103230 lncRNA upstream 531133 40020867 ~ 40021624 (+) True G82716
TU103212 lncRNA upstream 578179 39974261 ~ 39974578 (+) True G82702
TU103183 lncRNA upstream 687449 39865033 ~ 39865308 (+) True G82677
TU103176 lncRNA upstream 704876 39846963 ~ 39847881 (+) True G82670
TU103463 lncRNA downstream 21892 40576746 ~ 40578776 (+) True AMCG00010738
TU103507 lncRNA downstream 136041 40690895 ~ 40691478 (+) True G82940
TU103543 lncRNA downstream 222100 40776954 ~ 40777510 (+) True G82968
TU103546 lncRNA downstream 240241 40795095 ~ 40795556 (+) True G82971
TU103549 lncRNA downstream 277679 40832533 ~ 40832836 (+) True G82974
AMCG00010736 mRNA upstream 612 40541787 ~ 40552145 (+) True AMCG00010736
AMCG00010737 mRNA upstream 27289 40522257 ~ 40525468 (+) True AMCG00010737
AMCG00010734 mRNA upstream 63568 40486321 ~ 40489189 (+) True AMCG00010734
AMCG00010722 mRNA upstream 476039 40061768 ~ 40076718 (+) True AMCG00010722
AMCG00010716 mRNA upstream 579966 39917936 ~ 39972791 (+) True AMCG00010716
AMCG00010738 mRNA downstream 23297 40578151 ~ 40586122 (+) False AMCG00010738
AMCG00010739 mRNA downstream 36429 40591283 ~ 40595042 (+) True AMCG00010739
AMCG00010745 mRNA downstream 138113 40692967 ~ 40693329 (+) True AMCG00010745
AMCG00010744 mRNA downstream 143014 40697868 ~ 40702200 (+) True AMCG00010744
AMCG00010747 mRNA downstream 152405 40707259 ~ 40708428 (+) True AMCG00010747
TU103237 other upstream 502942 40047086 ~ 40049815 (+) True G82723
TU103177 other upstream 703388 39848946 ~ 39849369 (+) True G82671
TU102818 other upstream 1761989 38782079 ~ 38790768 (+) False AMCG00010687
TU103506 other downstream 133663 40688517 ~ 40690850 (+) True G82939
TU103580 other downstream 372325 40927179 ~ 40930030 (+) True G83001

Expression Profile