RNA id: AMCG00010743



Basic Information


Item Value
RNA id AMCG00010743
length 474
RNA type mRNA
GC content 0.68
exon number 3
gene id AMCG00010743
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 40719299 ~ 40728299 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTCAGGAACCACGAAGACCAACAGAGAGACCCTGGATGGCAAACGGAACTGGGAAGCCATCAAGCGGTGGGAGGAAGCCATCCAGATAACTCCAGAGGATGCGTCTCTTCATGAGATGAAGGCTCAGGCGATGAAGAGCTTCCAGACGGCCATCCACCTTGCTCCGGCGGAGCGGCCCCTGTGGGAGGAGGACCTGCGCTGGGGGCGCCGGCTGCAGGATGAGCGCCGGGCGGCAGTGGACCGGGCCCAGCGGGAGGAGGAGGCGGCACAGCGGCTGCTGGCGGTGCCGGAGCTCGTCCCAGACTACGACTTCGAGGGCGACGAGGTGGTGGCGGCCTGCACGGCCGTGGAGCAGCGGCAAAGGGAGTACGAGCGGCTCGGCAGGAGCGCGGCCGTCGTGGACACGGGGGGCGAGGGCCGCGGCGGGGGGTCGTCCTCTCAGCAGCACCTCGTCAAAGCACGGGGGCCCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU103507 lncRNA upstream 27821 40690895 ~ 40691478 (+) True G82940
TU103463 lncRNA upstream 140523 40576746 ~ 40578776 (+) True AMCG00010738
TU103405 lncRNA upstream 410310 40308755 ~ 40308989 (+) True G82854
TU103230 lncRNA upstream 697675 40020867 ~ 40021624 (+) True G82716
TU103212 lncRNA upstream 744721 39974261 ~ 39974578 (+) True G82702
TU103543 lncRNA downstream 48655 40776954 ~ 40777510 (+) True G82968
TU103546 lncRNA downstream 66796 40795095 ~ 40795556 (+) True G82971
TU103549 lncRNA downstream 104234 40832533 ~ 40832836 (+) True G82974
TU103581 lncRNA downstream 198880 40927179 ~ 40930030 (+) False G83001
TU103638 lncRNA downstream 387560 41115859 ~ 41116188 (+) True G83045
AMCG00010747 mRNA upstream 10871 40707259 ~ 40708428 (+) True AMCG00010747
AMCG00010744 mRNA upstream 17099 40697868 ~ 40702200 (+) True AMCG00010744
AMCG00010745 mRNA upstream 25970 40692967 ~ 40693329 (+) True AMCG00010745
AMCG00010739 mRNA upstream 124257 40591283 ~ 40595042 (+) True AMCG00010739
AMCG00010738 mRNA upstream 133177 40578151 ~ 40586122 (+) False AMCG00010738
AMCG00010749 mRNA downstream 103783 40832082 ~ 40845381 (+) True AMCG00010749
AMCG00010748 mRNA downstream 133376 40861675 ~ 40876578 (+) True AMCG00010748
AMCG00010750 mRNA downstream 166501 40894800 ~ 40902456 (+) True AMCG00010750
AMCG00010751 mRNA downstream 215154 40943453 ~ 40960484 (+) True AMCG00010751
AMCG00010759 mRNA downstream 255293 40983592 ~ 41020709 (+) True AMCG00010759
TU103506 other upstream 28449 40688517 ~ 40690850 (+) True G82939
TU103450 other upstream 164445 40552757 ~ 40554854 (+) False AMCG00010735
TU103237 other upstream 669484 40047086 ~ 40049815 (+) True G82723
TU103177 other upstream 869930 39848946 ~ 39849369 (+) True G82671
TU102822 other upstream 1928531 38782079 ~ 38790768 (+) False AMCG00010687
TU103580 other downstream 198880 40927179 ~ 40930030 (+) True G83001

Expression Profile