RNA id: TU101326


Basic Information

Item Value
RNA id TU101326
length 247
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G81215
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 32968261 ~ 32968507 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtatcatctgcaaatttgacaagtttgctaactatcccagagtccagatcattaatatagattagaaaaagcaaaggccctagtactgatccctgtggaactccactaacaacctcactccagttagaagcaactcctctaatcgacaccctctgcttcctatacatcaaccagttcataatccatctacttacattaccctgaatgcctacagcttccaatttgaggatcagtctttggtgtggaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU101243 lncRNA upstream 293607 32576649 ~ 32674654 (+) True G81149
TU101202 lncRNA upstream 437995 32474033 ~ 32530266 (+) True AMCG00010497
TU101189 lncRNA upstream 499998 32467842 ~ 32468263 (+) True G81115
TU101177 lncRNA upstream 595395 32372463 ~ 32372866 (+) True G81103
TU101161 lncRNA upstream 659968 32306293 ~ 32308293 (+) True G81089
TU101342 lncRNA downstream 58390 33026897 ~ 33027960 (+) True G81226
TU101405 lncRNA downstream 342345 33310852 ~ 33315569 (+) True G81279
TU101487 lncRNA downstream 967907 33936414 ~ 33938237 (+) True AMCG00010529
TU101528 lncRNA downstream 1064197 34032704 ~ 34035798 (+) True G81372
TU101539 lncRNA downstream 1134331 34102838 ~ 34104640 (+) True G81383
AMCG00010502 mRNA upstream 110436 32845391 ~ 32857825 (+) True AMCG00010502
AMCG00010503 mRNA upstream 144263 32805608 ~ 32823998 (+) True AMCG00010503
AMCG00010501 mRNA upstream 278517 32665516 ~ 32689744 (+) True AMCG00010501
AMCG00010497 mRNA upstream 441363 32508815 ~ 32526898 (+) False AMCG00010497
AMCG00010494 mRNA upstream 473023 32469022 ~ 32495238 (+) True AMCG00010494
AMCG00010513 mRNA downstream 72488 33040995 ~ 33057801 (+) True AMCG00010513
AMCG00010512 mRNA downstream 109324 33077831 ~ 33091942 (+) True AMCG00010512
AMCG00010510 mRNA downstream 133453 33101960 ~ 33103367 (+) True AMCG00010510
AMCG00010511 mRNA downstream 137425 33105932 ~ 33109710 (+) True AMCG00010511
AMCG00010519 mRNA downstream 570343 33538850 ~ 33583439 (+) True AMCG00010519
TU100533 other upstream 3464810 29494617 ~ 29503451 (+) False AMCG00010431
TU100171 other upstream 5061432 27906497 ~ 27906829 (+) True G80326
TU100109 other upstream 5093330 27869457 ~ 27874931 (+) False AMCG00010393
TU100084 other upstream 5411254 27556415 ~ 27557007 (+) True G80249
TU99961 other upstream 6573739 26380467 ~ 26394522 (+) False AMCG00010369
TU101485 other downstream 935308 33903815 ~ 33935416 (+) False AMCG00010529
TU101662 other downstream 1732931 34701438 ~ 34707394 (+) True G81496
TU101759 other downstream 2043808 35012315 ~ 35012693 (+) True G81576
TU101832 other downstream 2501828 35470335 ~ 35477584 (+) True AMCG00010562
TU102021 other downstream 3108606 36077113 ~ 36079892 (+) True AMCG00010578

Expression Profile