RNA id: TU101763



Basic Information


Item Value
RNA id TU101763
length 260
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G81580
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 35016075 ~ 35016334 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCTGTGATGTCTGCAGTAAAGCCCAGTTTGCAGTGGCACCTGAATGACCCCATGGTATTGATGCATTGTCCATTTTTGCATAGGTTGGGCATGACTCTGCACTCATCTATATCTGTTGATTTAAGACCGtaccaaacaatacaatacattgtaatacaatacattgcaAAAATCGAAAAGTGAAGTATGTGAAGGAATAGCAATTCACACAATCTTTAAACTTTTTATACGATATACACTATCTGTAGCTTCAAAGGCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU101760 lncRNA upstream 2421 35012955 ~ 35013654 (+) True G81577
TU101758 lncRNA upstream 3885 35008572 ~ 35012190 (+) True G81575
TU101677 lncRNA upstream 170199 34756519 ~ 34845876 (+) False AMCG00010545
TU101655 lncRNA upstream 319771 34694859 ~ 34696304 (+) True G81489
TU101644 lncRNA upstream 330313 34684289 ~ 34685762 (+) True G81479
TU101764 lncRNA downstream 575 35016909 ~ 35017132 (+) True G81581
TU101765 lncRNA downstream 22923 35039257 ~ 35039467 (+) True G81582
TU101766 lncRNA downstream 34071 35050405 ~ 35050612 (+) True G81583
TU101769 lncRNA downstream 86018 35102352 ~ 35102584 (+) True G81586
TU101845 lncRNA downstream 464466 35480800 ~ 35526188 (+) True AMCG00010563
AMCG00010548 mRNA upstream 12187 34962348 ~ 35003888 (+) True AMCG00010548
AMCG00010550 mRNA upstream 84920 34930547 ~ 34931155 (+) True AMCG00010550
AMCG00010547 mRNA upstream 111713 34903503 ~ 34904362 (+) True AMCG00010547
AMCG00010546 mRNA upstream 158554 34847908 ~ 34857521 (+) True AMCG00010546
AMCG00010545 mRNA upstream 171224 34798087 ~ 34844851 (+) True AMCG00010545
AMCG00010553 mRNA downstream 83781 35100115 ~ 35107055 (+) True AMCG00010553
AMCG00010552 mRNA downstream 105280 35121614 ~ 35139130 (+) True AMCG00010552
AMCG00010551 mRNA downstream 126232 35142566 ~ 35149632 (+) True AMCG00010551
AMCG00010557 mRNA downstream 166597 35182931 ~ 35183883 (+) True AMCG00010557
AMCG00010555 mRNA downstream 173049 35189383 ~ 35193509 (+) True AMCG00010555
TU101759 other upstream 3382 35012315 ~ 35012693 (+) True G81576
TU101662 other upstream 308681 34701438 ~ 34707394 (+) True G81496
TU101485 other upstream 1080659 33903815 ~ 33935416 (+) False AMCG00010529
TU100533 other upstream 5512624 29494617 ~ 29503451 (+) False AMCG00010431
TU100171 other upstream 7109246 27906497 ~ 27906829 (+) True G80326
TU101832 other downstream 454001 35470335 ~ 35477584 (+) True AMCG00010562
TU102021 other downstream 1060779 36077113 ~ 36079892 (+) True AMCG00010578
TU102028 other downstream 1075205 36091539 ~ 36094376 (+) False AMCG00010585
TU102256 other downstream 2214094 37230428 ~ 37251169 (+) True G81971
TU102257 other downstream 2219432 37235766 ~ 37251169 (+) False G81971

Expression Profile