RNA id: TU101764



Basic Information


Item Value
RNA id TU101764
length 224
lncRNA type inter_gene
GC content 0.55
exon number 1
gene id G81581
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 35016909 ~ 35017132 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTGAGCCATCTGTGGTGTAACCGGGGCCATGGGGACAGAGCTTCTTGTACTGTGTGGTTCCAGGCAAGGGGCATAGTTCACACTGGTTGCCCCAGCCTCGCCCGCCATCACAGCAACACTCCGACTTGGTGGAAGGGTTACGACTGCTAGAAGACATCTGGCACATAGTCTGCAGGACCTCAGTGAAGCAGAAACCCTCCCGATAGTCTGTGGaagtaaaacag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU101763 lncRNA upstream 575 35016075 ~ 35016334 (+) True G81580
TU101760 lncRNA upstream 3255 35012955 ~ 35013654 (+) True G81577
TU101758 lncRNA upstream 4719 35008572 ~ 35012190 (+) True G81575
TU101677 lncRNA upstream 171033 34756519 ~ 34845876 (+) False AMCG00010545
TU101655 lncRNA upstream 320605 34694859 ~ 34696304 (+) True G81489
TU101765 lncRNA downstream 22125 35039257 ~ 35039467 (+) True G81582
TU101766 lncRNA downstream 33273 35050405 ~ 35050612 (+) True G81583
TU101769 lncRNA downstream 85220 35102352 ~ 35102584 (+) True G81586
TU101845 lncRNA downstream 463668 35480800 ~ 35526188 (+) True AMCG00010563
TU101882 lncRNA downstream 645031 35662163 ~ 35666680 (+) True G81675
AMCG00010548 mRNA upstream 13021 34962348 ~ 35003888 (+) True AMCG00010548
AMCG00010550 mRNA upstream 85754 34930547 ~ 34931155 (+) True AMCG00010550
AMCG00010547 mRNA upstream 112547 34903503 ~ 34904362 (+) True AMCG00010547
AMCG00010546 mRNA upstream 159388 34847908 ~ 34857521 (+) True AMCG00010546
AMCG00010545 mRNA upstream 172058 34798087 ~ 34844851 (+) True AMCG00010545
AMCG00010553 mRNA downstream 82983 35100115 ~ 35107055 (+) True AMCG00010553
AMCG00010552 mRNA downstream 104482 35121614 ~ 35139130 (+) True AMCG00010552
AMCG00010551 mRNA downstream 125434 35142566 ~ 35149632 (+) True AMCG00010551
AMCG00010557 mRNA downstream 165799 35182931 ~ 35183883 (+) True AMCG00010557
AMCG00010555 mRNA downstream 172251 35189383 ~ 35193509 (+) True AMCG00010555
TU101759 other upstream 4216 35012315 ~ 35012693 (+) True G81576
TU101662 other upstream 309515 34701438 ~ 34707394 (+) True G81496
TU101485 other upstream 1081493 33903815 ~ 33935416 (+) False AMCG00010529
TU100533 other upstream 5513458 29494617 ~ 29503451 (+) False AMCG00010431
TU100171 other upstream 7110080 27906497 ~ 27906829 (+) True G80326
TU101832 other downstream 453203 35470335 ~ 35477584 (+) True AMCG00010562
TU102021 other downstream 1059981 36077113 ~ 36079892 (+) True AMCG00010578
TU102028 other downstream 1074407 36091539 ~ 36094376 (+) False AMCG00010585
TU102256 other downstream 2213296 37230428 ~ 37251169 (+) True G81971
TU102257 other downstream 2218634 37235766 ~ 37251169 (+) False G81971

Expression Profile