RNA id: TU102751


Basic Information

Item Value
RNA id TU102751
length 259
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G82338
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 38474850 ~ 38475108 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ctttaagtgtagactttcattttaatttgagggcagttacatcaAACGGtagtgaacggtgtaggaattacaccaatttttatatgtgatccccccaattttaggggctcaaaagtatgtggacaaactaacataatcatgaattaaattgtgagtttcaatacttggtggcaaatcctttgcagtcaatgactgcctgaagtctgaacccatagacatcaccagatgctgggtttcttccctggtgatgttttgccag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU102649 lncRNA upstream 49801 38423480 ~ 38425049 (+) True G82285
TU102651 lncRNA upstream 104808 38367669 ~ 38370042 (+) True AMCG00010656
TU102627 lncRNA upstream 121017 38352219 ~ 38353833 (+) False AMCG00010655
TU102610 lncRNA upstream 187322 38285579 ~ 38287528 (+) True G82250
TU102594 lncRNA upstream 222840 38247021 ~ 38252010 (+) True AMCG00010648
TU102752 lncRNA downstream 2111 38477219 ~ 38483324 (+) True G82339
TU102776 lncRNA downstream 83358 38558466 ~ 38564283 (+) True G82353
TU102860 lncRNA downstream 317217 38792325 ~ 38797886 (+) False AMCG00010687
TU102926 lncRNA downstream 551976 39027084 ~ 39027418 (+) True G82468
TU102954 lncRNA downstream 627812 39102920 ~ 39103266 (+) True G82488
AMCG00010661 mRNA upstream 689 38468372 ~ 38474161 (+) True AMCG00010661
AMCG00010660 mRNA upstream 15914 38447303 ~ 38458936 (+) True AMCG00010660
AMCG00010654 mRNA upstream 96680 38375459 ~ 38378170 (+) True AMCG00010654
AMCG00010656 mRNA upstream 102199 38370024 ~ 38372651 (+) False AMCG00010656
AMCG00010655 mRNA upstream 120888 38348278 ~ 38353962 (+) True AMCG00010655
AMCG00010670 mRNA downstream 9013 38484121 ~ 38487527 (+) True AMCG00010670
AMCG00010671 mRNA downstream 12581 38487689 ~ 38488286 (+) True AMCG00010671
AMCG00010669 mRNA downstream 40829 38515937 ~ 38534810 (+) True AMCG00010669
AMCG00010672 mRNA downstream 156696 38631804 ~ 38633945 (+) True AMCG00010672
AMCG00010681 mRNA downstream 161368 38636476 ~ 38638532 (+) False AMCG00010681
TU102593 other upstream 222840 38247021 ~ 38252010 (+) False AMCG00010648
TU102591 other upstream 305319 38169156 ~ 38169531 (+) True G82236
TU102525 other upstream 586687 37886220 ~ 37888163 (+) True G82192
TU102276 other upstream 1210801 37261324 ~ 37264049 (+) True G81987
TU102257 other upstream 1223681 37235766 ~ 37251169 (+) False G81971
TU102794 other downstream 162395 38637503 ~ 38640125 (+) True AMCG00010681
TU102818 other downstream 306971 38782079 ~ 38790768 (+) False AMCG00010687
TU102819 other downstream 306971 38782079 ~ 38790768 (+) False AMCG00010687
TU102820 other downstream 306971 38782079 ~ 38790768 (+) True AMCG00010687
TU102822 other downstream 306971 38782079 ~ 38790768 (+) False AMCG00010687

Expression Profile