RNA id: TU103017



Basic Information


Item Value
RNA id TU103017
length 226
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G82545
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 39306929 ~ 39307154 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tgtgtgtgtgagtatgtgtgtgtctgtatgtgtatgtgtgtgtgagtatgtgtgtgtctgtatgtgtatgtgtgggtctgtgtgtgtgtctgtatgtatgtgtgtgtctgtatgtatgtgtgtgtgtgtctgtatgtgtatgtgtgtgtctgtgtgtgtgagtatgtgtgtgtctgtatgtatgtgtgtctgtatgtgtgtgtgtgtctgtgtgtgtgtgtgtctg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU102992 lncRNA upstream 58304 39242857 ~ 39248625 (+) True AMCG00010695
TU102993 lncRNA upstream 68441 39235825 ~ 39238488 (+) True G82523
TU102991 lncRNA upstream 86722 39219919 ~ 39220207 (+) True G82521
TU102990 lncRNA upstream 89851 39216827 ~ 39217078 (+) True G82520
TU102961 lncRNA upstream 154776 39151807 ~ 39152153 (+) True G82495
TU103022 lncRNA downstream 64544 39371698 ~ 39374063 (+) True G82548
TU103046 lncRNA downstream 149601 39456755 ~ 39509252 (+) False G82561
TU103043 lncRNA downstream 199329 39506483 ~ 39509252 (+) True G82561
TU103121 lncRNA downstream 239387 39546541 ~ 39546879 (+) True G82620
TU103138 lncRNA downstream 371319 39678473 ~ 39695118 (+) True G82637
AMCG00010695 mRNA upstream 58362 39243855 ~ 39248567 (+) False AMCG00010695
AMCG00010694 mRNA upstream 135388 39169121 ~ 39171541 (+) True AMCG00010694
AMCG00010693 mRNA upstream 139358 39157937 ~ 39167571 (+) True AMCG00010693
AMCG00010692 mRNA upstream 219676 39075665 ~ 39087253 (+) True AMCG00010692
AMCG00010690 mRNA upstream 323118 38978680 ~ 38983811 (+) True AMCG00010690
AMCG00010696 mRNA downstream 5951 39313105 ~ 39333836 (+) True AMCG00010696
AMCG00010705 mRNA downstream 105362 39412516 ~ 39435225 (+) True AMCG00010705
AMCG00010706 mRNA downstream 128884 39436038 ~ 39444075 (+) True AMCG00010706
AMCG00010700 mRNA downstream 149183 39456337 ~ 39463494 (+) True AMCG00010700
AMCG00010702 mRNA downstream 172123 39479277 ~ 39488974 (+) True AMCG00010702
TU102818 other upstream 516161 38782079 ~ 38790768 (+) False AMCG00010687
TU102819 other upstream 516161 38782079 ~ 38790768 (+) False AMCG00010687
TU102820 other upstream 516161 38782079 ~ 38790768 (+) True AMCG00010687
TU102822 other upstream 516161 38782079 ~ 38790768 (+) False AMCG00010687
TU102794 other upstream 666804 38637503 ~ 38640125 (+) True AMCG00010681
TU103177 other downstream 541792 39848946 ~ 39849369 (+) True G82671
TU103237 other downstream 739932 40047086 ~ 40049815 (+) True G82723
TU103450 other downstream 1245603 40552757 ~ 40554854 (+) False AMCG00010735
TU103506 other downstream 1381363 40688517 ~ 40690850 (+) True G82939
TU103580 other downstream 1620025 40927179 ~ 40930030 (+) True G83001

Expression Profile