RNA id: TU103140


Basic Information

Item Value
RNA id TU103140
length 207
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G82639
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 39699161 ~ 39699367 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCCCGGTCCATGCAGGCAAAGCATCTCTCCTTCGTGTCTTCACATCTGTGCAGCATGTTTACTGTGTAGACCCAGGCTTCTGTCAGCATGTCTAACAAATCTAAAAATCACTTTCTGCCACTGCCATGTAATGGGTTTTATTCGTGAACACTACGCACTCCATTTTCCATCTGAAAGGCGGGAATAATCTGGAGAATAAACCCAGCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU103139 lncRNA upstream 1387 39697553 ~ 39697774 (+) True G82638
TU103138 lncRNA upstream 4043 39678473 ~ 39695118 (+) True G82637
TU103121 lncRNA upstream 152282 39546541 ~ 39546879 (+) True G82620
TU103046 lncRNA upstream 189909 39456755 ~ 39509252 (+) False G82561
TU103043 lncRNA upstream 189909 39506483 ~ 39509252 (+) True G82561
TU103144 lncRNA downstream 9796 39709163 ~ 39710896 (+) True G82643
TU103145 lncRNA downstream 11596 39710963 ~ 39716180 (+) True G82644
TU103166 lncRNA downstream 85792 39785159 ~ 39785468 (+) True G82665
TU103174 lncRNA downstream 140697 39840064 ~ 39841471 (+) True G82668
TU103176 lncRNA downstream 147596 39846963 ~ 39847881 (+) True G82670
AMCG00010708 mRNA upstream 43821 39615136 ~ 39655340 (+) True AMCG00010708
AMCG00010707 mRNA upstream 105916 39575604 ~ 39593245 (+) True AMCG00010707
AMCG00010703 mRNA upstream 140948 39549522 ~ 39558213 (+) True AMCG00010703
AMCG00010701 mRNA upstream 193403 39499001 ~ 39505758 (+) True AMCG00010701
AMCG00010702 mRNA upstream 210187 39479277 ~ 39488974 (+) True AMCG00010702
AMCG00010715 mRNA downstream 103935 39803302 ~ 39803661 (+) True AMCG00010715
AMCG00010712 mRNA downstream 114065 39813432 ~ 39834594 (+) True AMCG00010712
AMCG00010714 mRNA downstream 146406 39845773 ~ 39853457 (+) True AMCG00010714
AMCG00010717 mRNA downstream 169805 39869172 ~ 39875972 (+) True AMCG00010717
AMCG00010719 mRNA downstream 185065 39884432 ~ 39891626 (+) True AMCG00010719
TU102818 other upstream 908393 38782079 ~ 38790768 (+) False AMCG00010687
TU102819 other upstream 908393 38782079 ~ 38790768 (+) False AMCG00010687
TU102820 other upstream 908393 38782079 ~ 38790768 (+) True AMCG00010687
TU102822 other upstream 908393 38782079 ~ 38790768 (+) False AMCG00010687
TU102794 other upstream 1059036 38637503 ~ 38640125 (+) True AMCG00010681
TU103177 other downstream 149579 39848946 ~ 39849369 (+) True G82671
TU103237 other downstream 347719 40047086 ~ 40049815 (+) True G82723
TU103450 other downstream 853390 40552757 ~ 40554854 (+) False AMCG00010735
TU103506 other downstream 989150 40688517 ~ 40690850 (+) True G82939
TU103580 other downstream 1227812 40927179 ~ 40930030 (+) True G83001

Expression Profile