RNA id: TU103549


Basic Information

Item Value
RNA id TU103549
length 304
lncRNA type intronic
GC content 0.50
exon number 1
gene id G82974
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 40832533 ~ 40832836 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ggggagtttgttcagattgtgacgcctctctgtgtgaagaagtgtctcctgttttctgtcttgaatgccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcccttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcaggtcctcagtctctcagtaggactttcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU103546 lncRNA upstream 36977 40795095 ~ 40795556 (+) True G82971
TU103543 lncRNA upstream 55023 40776954 ~ 40777510 (+) True G82968
TU103507 lncRNA upstream 141055 40690895 ~ 40691478 (+) True G82940
TU103463 lncRNA upstream 253757 40576746 ~ 40578776 (+) True AMCG00010738
TU103405 lncRNA upstream 523544 40308755 ~ 40308989 (+) True G82854
TU103581 lncRNA downstream 94343 40927179 ~ 40930030 (+) False G83001
TU103638 lncRNA downstream 283023 41115859 ~ 41116188 (+) True G83045
AMCG00010743 mRNA upstream 104234 40719299 ~ 40728299 (+) True AMCG00010743
AMCG00010747 mRNA upstream 124105 40707259 ~ 40708428 (+) True AMCG00010747
AMCG00010744 mRNA upstream 130333 40697868 ~ 40702200 (+) True AMCG00010744
AMCG00010745 mRNA upstream 139204 40692967 ~ 40693329 (+) True AMCG00010745
AMCG00010739 mRNA upstream 237491 40591283 ~ 40595042 (+) True AMCG00010739
AMCG00010748 mRNA downstream 28839 40861675 ~ 40876578 (+) True AMCG00010748
AMCG00010750 mRNA downstream 61964 40894800 ~ 40902456 (+) True AMCG00010750
AMCG00010751 mRNA downstream 110617 40943453 ~ 40960484 (+) True AMCG00010751
AMCG00010759 mRNA downstream 150756 40983592 ~ 41020709 (+) True AMCG00010759
AMCG00010756 mRNA downstream 200850 41033686 ~ 41036633 (+) True AMCG00010756
TU103506 other upstream 141683 40688517 ~ 40690850 (+) True G82939
TU103450 other upstream 277679 40552757 ~ 40554854 (+) False AMCG00010735
TU103237 other upstream 782718 40047086 ~ 40049815 (+) True G82723
TU103177 other upstream 983164 39848946 ~ 39849369 (+) True G82671
TU102822 other upstream 2041765 38782079 ~ 38790768 (+) False AMCG00010687
TU103580 other downstream 94343 40927179 ~ 40930030 (+) True G83001

Expression Profile