RNA id: TU103638


Basic Information

Item Value
RNA id TU103638
length 330
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G83045
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 41115859 ~ 41116188 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TTTATTATTGAAAGAATTACACActgcatataaatgtattactttcaCCTTTGTGTCTCAATACAAATAacgaaataaaacattttaaaaaatcctaGAAAAAATGTGTTcgacataaaaagaaaaagaaaaagaaaaagaaatagaacGTTTTGGACACGtgacacaataaaaaaaagtctgttcGCTGTCCTGAGAGCCGAACAGCCACTTATTACCGGCCTCAGCCTCGGCAACACTGCGTGCGACTTATTTACactaaacatacatacatacacacacacatacattatatatatacatatatatatatacatatatatatatata

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU103581 lncRNA upstream 185829 40927179 ~ 40930030 (+) False G83001
TU103549 lncRNA upstream 283023 40832533 ~ 40832836 (+) True G82974
TU103546 lncRNA upstream 320303 40795095 ~ 40795556 (+) True G82971
TU103543 lncRNA upstream 338349 40776954 ~ 40777510 (+) True G82968
TU103507 lncRNA upstream 424381 40690895 ~ 40691478 (+) True G82940
AMCG00010756 mRNA upstream 79226 41033686 ~ 41036633 (+) True AMCG00010756
AMCG00010759 mRNA upstream 95150 40983592 ~ 41020709 (+) True AMCG00010759
AMCG00010751 mRNA upstream 155375 40943453 ~ 40960484 (+) True AMCG00010751
AMCG00010750 mRNA upstream 213403 40894800 ~ 40902456 (+) True AMCG00010750
AMCG00010748 mRNA upstream 239281 40861675 ~ 40876578 (+) True AMCG00010748
AMCG00010760 mRNA downstream 9812 41126000 ~ 41130780 (+) True AMCG00010760
AMCG00010757 mRNA downstream 21442 41137630 ~ 41146739 (+) True AMCG00010757
AMCG00010758 mRNA downstream 35216 41151404 ~ 41158268 (+) True AMCG00010758
TU103580 other upstream 185829 40927179 ~ 40930030 (+) True G83001
TU103506 other upstream 425009 40688517 ~ 40690850 (+) True G82939
TU103450 other upstream 561005 40552757 ~ 40554854 (+) False AMCG00010735
TU103237 other upstream 1066044 40047086 ~ 40049815 (+) True G82723
TU103177 other upstream 1266490 39848946 ~ 39849369 (+) True G82671

Expression Profile