RNA id: TU94316


Basic Information

Item Value
RNA id TU94316
length 331
lncRNA type inter_gene
GC content 0.33
exon number 2
gene id G75528
representative False

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 47559 ~ 98029 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tcattcattttGCAAGTTTTAAActccatttattattttcaaaaaacagaacaagtgaaattgtattttctttggtgCACATTACTGCAATCATGAGGGTCAGGATACACGTGTCATTCATTTTTCAGGTTATATTCAGGTTGCTGGATTAGGTTCCTGGTGTTAGTTATCCTCCAAaactttcttttcatgtttgaaGTCCAgttctctgcacacacacaaatttaaACAAGCAGAACTGCATTGATGCATCCATCATTTTCTGGGTTGTTTGTTACTTGGGCATATTTAcctaaagaataataaaacaaattattagtATACATGGATA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU94324 lncRNA upstream 6159 31464 ~ 41400 (+) True G75533
TU94349 lncRNA downstream 14290 106073 ~ 107045 (+) True G75556
TU94366 lncRNA downstream 213010 304793 ~ 319899 (+) True G75572
TU94403 lncRNA downstream 495081 586864 ~ 608775 (+) True G75600
TU94449 lncRNA downstream 648696 740479 ~ 741030 (+) True G75642
TU94451 lncRNA downstream 651102 742885 ~ 746072 (+) True G75644
AMCG00009813 mRNA downstream 15450 107233 ~ 107590 (+) True AMCG00009813
AMCG00009810 mRNA downstream 16901 108684 ~ 122048 (+) True AMCG00009810
AMCG00009815 mRNA downstream 140251 232034 ~ 233872 (+) True AMCG00009815
AMCG00009818 mRNA downstream 540611 632394 ~ 654167 (+) True AMCG00009818
AMCG00009820 mRNA downstream 597116 688899 ~ 702109 (+) True AMCG00009820
TU94510 other downstream 775897 867680 ~ 871735 (+) False AMCG00009821
TU94585 other downstream 945423 1037206 ~ 1037442 (+) True G75745
TU94657 other downstream 1230835 1322618 ~ 1327564 (+) False AMCG00009844
TU94663 other downstream 1242184 1333967 ~ 1335050 (+) True G75807
TU94664 other downstream 1268753 1360536 ~ 1363834 (+) True AMCG00009851

Expression Profile