RNA id: TU95420



Basic Information


Item Value
RNA id TU95420
length 276
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G76418
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 5771674 ~ 5771949 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TGTTGTTATCGCAAAACCAATCCGCTCTCATATTCTCTCTGTAAGATAACGCAGCGGTGGGTTACAATAATACAGAACACGTCCTATCACCTGTTTCCCTGCCGGCTGAACATTTCCGTtgacttttcttttcaattttcatttttcttgccTCCCTATCAGTGACTTTCGTTCGTGCAGCTCATCTGCATGTGGTTTCTATAggctgcaaaacaaacacagtgattTATCTCACTACTTACACTCGCGGTACCAGCCATTTTATAAACAATGCGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU95419 lncRNA upstream 582 5770255 ~ 5771092 (+) True G76417
TU95417 lncRNA upstream 2622 5767877 ~ 5769052 (+) False AMCG00009915
TU95410 lncRNA upstream 20462 5744257 ~ 5751212 (+) True G76408
TU95334 lncRNA upstream 308863 5462523 ~ 5462811 (+) True G76346
TU95253 lncRNA upstream 523493 5243727 ~ 5248181 (+) False AMCG00009897
TU95439 lncRNA downstream 4007 5775956 ~ 5776174 (+) True G76434
TU95468 lncRNA downstream 125361 5897310 ~ 5900982 (+) True G76460
TU95493 lncRNA downstream 173757 5945706 ~ 5946053 (+) True G76484
TU95496 lncRNA downstream 175929 5947878 ~ 5950820 (+) True G76486
TU95533 lncRNA downstream 311902 6083851 ~ 6085782 (+) False AMCG00009929
AMCG00009915 mRNA upstream 3615 5766337 ~ 5768059 (+) True AMCG00009915
AMCG00009916 mRNA upstream 27532 5717698 ~ 5744142 (+) True AMCG00009916
AMCG00009914 mRNA upstream 168691 5595438 ~ 5602983 (+) True AMCG00009914
AMCG00009911 mRNA upstream 177667 5562975 ~ 5594007 (+) True AMCG00009911
AMCG00009909 mRNA upstream 246112 5509084 ~ 5525562 (+) True AMCG00009909
AMCG00009919 mRNA downstream 14476 5786425 ~ 5794926 (+) True AMCG00009919
AMCG00009923 mRNA downstream 118331 5890280 ~ 5894977 (+) True AMCG00009923
AMCG00009922 mRNA downstream 161072 5933021 ~ 5940090 (+) True AMCG00009922
AMCG00009926 mRNA downstream 214318 5986267 ~ 5998592 (+) True AMCG00009926
AMCG00009929 mRNA downstream 287293 6059242 ~ 6085806 (+) True AMCG00009929
TU94664 other upstream 4407840 1360536 ~ 1363834 (+) True AMCG00009851
TU94663 other upstream 4436624 1333967 ~ 1335050 (+) True G75807
TU94657 other upstream 4444110 1322618 ~ 1327564 (+) False AMCG00009844
TU94585 other upstream 4734232 1037206 ~ 1037442 (+) True G75745
TU94510 other upstream 4899939 867680 ~ 871735 (+) False AMCG00009821
TU96625 other downstream 5377677 11149626 ~ 11155469 (+) True G77423
TU96770 other downstream 5928757 11700706 ~ 11701081 (+) True G77541
TU97434 other downstream 9869012 15640961 ~ 15642841 (+) False AMCG00010119
TU97557 other downstream 10285582 16057531 ~ 16060087 (+) True G78198
TU97783 other downstream 11451933 17223882 ~ 17225340 (+) False AMCG00010164

Expression Profile