RNA id: TU95571



Basic Information


Item Value
RNA id TU95571
length 361
lncRNA type inter_gene
GC content 0.45
exon number 3
gene id G76550
representative False

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 6161456 ~ 6166615 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


AAGGAAGTGGCGTGGCCCAGGTAGTAAAGCACCTGTCATGTGGGGGGGCTCCGCAGCTAGACCAATACCTGGACTATCATTATGATCAGCATTACAGCAGTGGCTAAGCAGATAGAAACTACAGCAATAAGATGCAGCTTTCAACGAGTAAAGTGCCATTCATCATGTCTCACAACGATTCTTTACAATATGACCGAGGCTTAATTGGCTTTGATTCATCTGATGGAGTTCTAGTGAACACAACTGCCCAAATAGTACTGACAAGTAAAGTGACCACAGTCTTCCTCCCGGTTGTCTACATCTTTGTGTTCTGTGTCAGTCTTCCTCCCGGTTGTCTACATCTTTGTGTTCTGTGTNNNNN

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU95533 lncRNA upstream 75674 6083851 ~ 6085782 (+) False AMCG00009929
TU95496 lncRNA upstream 210636 5947878 ~ 5950820 (+) True G76486
TU95493 lncRNA upstream 215403 5945706 ~ 5946053 (+) True G76484
TU95468 lncRNA upstream 260474 5897310 ~ 5900982 (+) True G76460
TU95439 lncRNA upstream 385282 5775956 ~ 5776174 (+) True G76434
TU95577 lncRNA downstream 996 6167611 ~ 6168308 (+) True G76555
TU95708 lncRNA downstream 575317 6741932 ~ 6742239 (+) True G76658
TU95709 lncRNA downstream 587906 6754521 ~ 6754936 (+) True G76659
TU95713 lncRNA downstream 624151 6790766 ~ 6792207 (+) True G76663
TU95821 lncRNA downstream 892229 7058844 ~ 7062734 (+) True AMCG00009959
AMCG00009928 mRNA upstream 6598 6150018 ~ 6154858 (+) True AMCG00009928
AMCG00009930 mRNA upstream 12065 6112296 ~ 6149391 (+) True AMCG00009930
AMCG00009929 mRNA upstream 75650 6059242 ~ 6085806 (+) True AMCG00009929
AMCG00009926 mRNA upstream 162864 5986267 ~ 5998592 (+) True AMCG00009926
AMCG00009922 mRNA upstream 221366 5933021 ~ 5940090 (+) True AMCG00009922
AMCG00009936 mRNA downstream 13788 6180403 ~ 6185389 (+) True AMCG00009936
AMCG00009934 mRNA downstream 58921 6225536 ~ 6241567 (+) True AMCG00009934
AMCG00009935 mRNA downstream 83285 6249900 ~ 6284991 (+) True AMCG00009935
AMCG00009940 mRNA downstream 363449 6530064 ~ 6538910 (+) True AMCG00009940
AMCG00009945 mRNA downstream 499075 6665690 ~ 6670486 (+) True AMCG00009945
TU94664 other upstream 4797622 1360536 ~ 1363834 (+) True AMCG00009851
TU94663 other upstream 4826406 1333967 ~ 1335050 (+) True G75807
TU94657 other upstream 4833892 1322618 ~ 1327564 (+) False AMCG00009844
TU94585 other upstream 5124014 1037206 ~ 1037442 (+) True G75745
TU94510 other upstream 5289721 867680 ~ 871735 (+) False AMCG00009821
TU96625 other downstream 4983011 11149626 ~ 11155469 (+) True G77423
TU96770 other downstream 5534091 11700706 ~ 11701081 (+) True G77541
TU97434 other downstream 9474346 15640961 ~ 15642841 (+) False AMCG00010119
TU97557 other downstream 9890916 16057531 ~ 16060087 (+) True G78198
TU97783 other downstream 11057267 17223882 ~ 17225340 (+) False AMCG00010164

Expression Profile