RNA id: TU96350



Basic Information


Item Value
RNA id TU96350
length 355
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G77201
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 9517658 ~ 9518012 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aaaaaagtatttgatcctctgctgattttgtacgtttgcccactgacaaagaaatgatcagtctataattttaatggtaggtgtattttaacagtgagagacagaataacagcaaaaaaatccagaaaaacgcatttcaaaaaagttatatattgatttgcatgttaatgagggaaataagcatttgaccccttcgacttagtacttggtggcaaaacccttgttggcaatcacagaggtcagacgtttcttatAGTTGGCCaacaggtttgcacacatctcaggagggattttgtcccactcctctttgcagatcctctccaagtcattaaggtttcgaggctgacgtttggcg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU96347 lncRNA upstream 86029 9429243 ~ 9431629 (+) True G77198
TU96341 lncRNA upstream 98288 9416430 ~ 9419370 (+) True G77192
TU96276 lncRNA upstream 165788 9351591 ~ 9351870 (+) True G77135
TU96265 lncRNA upstream 309139 9205635 ~ 9208519 (+) True G77125
TU96266 lncRNA upstream 312235 9204342 ~ 9205423 (+) True G77126
TU96357 lncRNA downstream 43297 9561309 ~ 9561806 (+) True G77207
TU96390 lncRNA downstream 223777 9741789 ~ 9743100 (+) True G77233
TU96413 lncRNA downstream 356856 9874868 ~ 9940435 (+) True G77253
TU96416 lncRNA downstream 404709 9922721 ~ 9926110 (+) True G77255
TU96453 lncRNA downstream 478342 9996354 ~ 9997885 (+) True G77285
AMCG00010006 mRNA upstream 103525 9392881 ~ 9414133 (+) True AMCG00010006
AMCG00010007 mRNA upstream 141914 9360116 ~ 9375744 (+) True AMCG00010007
AMCG00010005 mRNA upstream 167347 9347026 ~ 9350311 (+) True AMCG00010005
AMCG00010002 mRNA upstream 313559 9178039 ~ 9204099 (+) True AMCG00010002
AMCG00010003 mRNA upstream 346010 9073241 ~ 9171648 (+) True AMCG00010003
AMCG00010012 mRNA downstream 154209 9672221 ~ 9688099 (+) True AMCG00010012
AMCG00010013 mRNA downstream 172561 9690573 ~ 9713280 (+) True AMCG00010013
AMCG00010014 mRNA downstream 396030 9914042 ~ 9919171 (+) True AMCG00010014
AMCG00010017 mRNA downstream 627541 10145553 ~ 10154362 (+) True AMCG00010017
AMCG00010020 mRNA downstream 773962 10291974 ~ 10299643 (+) True AMCG00010020
TU94664 other upstream 8153824 1360536 ~ 1363834 (+) True AMCG00009851
TU94663 other upstream 8182608 1333967 ~ 1335050 (+) True G75807
TU94657 other upstream 8190094 1322618 ~ 1327564 (+) False AMCG00009844
TU94585 other upstream 8480216 1037206 ~ 1037442 (+) True G75745
TU94510 other upstream 8645923 867680 ~ 871735 (+) False AMCG00009821
TU96625 other downstream 1631614 11149626 ~ 11155469 (+) True G77423
TU96770 other downstream 2182694 11700706 ~ 11701081 (+) True G77541
TU97434 other downstream 6122949 15640961 ~ 15642841 (+) False AMCG00010119
TU97557 other downstream 6539519 16057531 ~ 16060087 (+) True G78198
TU97783 other downstream 7705870 17223882 ~ 17225340 (+) False AMCG00010164

Expression Profile