RNA id: TU97279



Basic Information


Item Value
RNA id TU97279
length 770
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G77958
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 14960272 ~ 14961505 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTCTTTGCCATTAGATTTCTCAAAGCCCATATCCTGAGCGTTACCTTGCATGTCCCATTGCTTTTGTCACTGGCTTTTGTAGGACCTGTCCCACTCTCATGTACAGCCTTCTTGGGCCAGAAACGGCTCAGTATTGGAGAAATGAAGGGATAAATGAAAGGCTCAAGGAACTTCTTGTAAACCCACAACAGCACTGGAATGACGATGCAGGGAATGCACACCATGGTTGGAGCTAAAATCTGAGGTTGTGTTAACAAGATGTTTGGATTGGAATGAGCGATAAAACTACACTTATTGCGAAAAACTGTTCCCGACACAAACACACCGTTCGATTCTCGGGTTTTGATTGGCTGATATATTCGGTGACGTCttccacaaaaaataatattggtGCAGCCGTTGGCCACAAAGTATGGCGCCACCTATATGTGGAGGACTAAACTAAAAAACGGTAATCAATTGCATGTAAGGAACTGGAATGTGTCCCCCCTTTCATGttataaacaaaaactgaactacaaaatacacaacaataataataattaatgaaaataaaatggcttAATGGACCAGCCAGTTGGCATGGAATAATCCAGAGCACAGAATGGATTGTCACACAAAACATAACCTGTGTTAAGGTACAAaacttcagttgaagcaacccttcagatcccagtgaatcaggcaccccagtgagcgcttccagtaaGAGGAGACTTTCAGCAGAAGGCGAGCGCCTGGGAAGGAAAAGTCACAGACACCGAAGTCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU97076 lncRNA upstream 1560076 13399908 ~ 13400196 (+) True G77796
TU96941 lncRNA upstream 2745751 12209013 ~ 12214521 (+) True G77673
TU96938 lncRNA upstream 2782783 12177228 ~ 12177489 (+) True G77670
TU96937 lncRNA upstream 2788951 12170098 ~ 12171321 (+) True G77669
TU96927 lncRNA upstream 2807951 12148931 ~ 12152321 (+) True G77661
TU97287 lncRNA downstream 30414 14991919 ~ 15029371 (+) False AMCG00010101
TU97274 lncRNA downstream 42529 15004034 ~ 15047855 (+) True G77954
TU97337 lncRNA downstream 243169 15204674 ~ 15221655 (+) True G78007
TU97343 lncRNA downstream 267388 15228893 ~ 15232199 (+) True G78012
TU97364 lncRNA downstream 345545 15307050 ~ 15308646 (+) True G78032
AMCG00010099 mRNA upstream 219303 14700320 ~ 14740969 (+) True AMCG00010099
AMCG00010098 mRNA upstream 288870 14656485 ~ 14671402 (+) True AMCG00010098
AMCG00010096 mRNA upstream 446179 14489911 ~ 14514093 (+) True AMCG00010096
AMCG00010094 mRNA upstream 512721 14440450 ~ 14447551 (+) True AMCG00010094
AMCG00010093 mRNA upstream 541465 14407608 ~ 14418807 (+) True AMCG00010093
AMCG00010102 mRNA downstream 16641 14978146 ~ 15000756 (+) True AMCG00010102
AMCG00010101 mRNA downstream 54878 15016383 ~ 15032181 (+) True AMCG00010101
AMCG00010109 mRNA downstream 123597 15085102 ~ 15099005 (+) True AMCG00010109
AMCG00010110 mRNA downstream 250500 15212005 ~ 15217546 (+) True AMCG00010110
AMCG00010111 mRNA downstream 478486 15439991 ~ 15442927 (+) True AMCG00010111
TU96770 other upstream 3259191 11700706 ~ 11701081 (+) True G77541
TU96625 other upstream 3804803 11149626 ~ 11155469 (+) True G77423
TU94664 other upstream 13596438 1360536 ~ 1363834 (+) True AMCG00009851
TU94663 other upstream 13625222 1333967 ~ 1335050 (+) True G75807
TU94657 other upstream 13632708 1322618 ~ 1327564 (+) False AMCG00009844
TU97434 other downstream 679456 15640961 ~ 15642841 (+) False AMCG00010119
TU97557 other downstream 1096026 16057531 ~ 16060087 (+) True G78198
TU97783 other downstream 2262377 17223882 ~ 17225340 (+) False AMCG00010164
TU97792 other downstream 2284132 17245637 ~ 17246988 (+) False AMCG00010160
TU97800 other downstream 2312882 17274387 ~ 17277998 (+) True G78396

Expression Profile