RNA id: TU97693



Basic Information


Item Value
RNA id TU97693
length 258
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G78302
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 16682917 ~ 16683174 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gagtacaggtgagaggcagccatcttgttgtttgactagtttcagacaagtcttagcattgctcattttgttttaagtttgccttaattgaagttagcattgtctgtagtttgcctaaattgaagtcaattcagttcagctgctgagttggtgaaagtaaacgggttgtagaagggagattttgtctaggactagcaggaattctgttgcaggaggagccaggtgtggcctgttaggtgtgaattgggggcaggtaga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU97690 lncRNA upstream 8298 16674109 ~ 16674619 (+) True G78300
TU97689 lncRNA upstream 10008 16672486 ~ 16672909 (+) True G78299
TU97635 lncRNA upstream 135425 16465564 ~ 16547492 (+) False AMCG00010144
TU97478 lncRNA upstream 947190 15729140 ~ 15735727 (+) True G78129
TU97476 lncRNA upstream 959023 15720179 ~ 15723894 (+) True G78127
TU97695 lncRNA downstream 5611 16688785 ~ 16689872 (+) True G78303
TU97709 lncRNA downstream 209055 16892229 ~ 16892600 (+) True G78316
TU97728 lncRNA downstream 371699 17054873 ~ 17062912 (+) True G78334
TU97781 lncRNA downstream 536862 17220036 ~ 17222106 (+) True AMCG00010164
TU97785 lncRNA downstream 543717 17226891 ~ 17228845 (+) True G78381
AMCG00010144 mRNA upstream 135297 16500835 ~ 16547620 (+) True AMCG00010144
AMCG00010145 mRNA upstream 228461 16420684 ~ 16454456 (+) True AMCG00010145
AMCG00010139 mRNA upstream 329813 16348742 ~ 16353104 (+) True AMCG00010139
AMCG00010140 mRNA upstream 343336 16335141 ~ 16339581 (+) True AMCG00010140
AMCG00010141 mRNA upstream 349440 16307230 ~ 16333477 (+) True AMCG00010141
AMCG00010151 mRNA downstream 39270 16722444 ~ 16732279 (+) True AMCG00010151
AMCG00010154 mRNA downstream 74628 16757802 ~ 16761758 (+) True AMCG00010154
AMCG00010153 mRNA downstream 86408 16769582 ~ 16774715 (+) True AMCG00010153
AMCG00010163 mRNA downstream 504255 17187429 ~ 17193350 (+) True AMCG00010163
AMCG00010164 mRNA downstream 536862 17220036 ~ 17225338 (+) False AMCG00010164
TU97557 other upstream 622830 16057531 ~ 16060087 (+) True G78198
TU97434 other upstream 1040076 15640961 ~ 15642841 (+) False AMCG00010119
TU96770 other upstream 4981836 11700706 ~ 11701081 (+) True G77541
TU96625 other upstream 5527448 11149626 ~ 11155469 (+) True G77423
TU94664 other upstream 15319083 1360536 ~ 1363834 (+) True AMCG00009851
TU97783 other downstream 540708 17223882 ~ 17225340 (+) False AMCG00010164
TU97792 other downstream 562463 17245637 ~ 17246988 (+) False AMCG00010160
TU97800 other downstream 591213 17274387 ~ 17277998 (+) True G78396
TU97819 other downstream 661245 17344419 ~ 17353488 (+) True G78410
TU98227 other downstream 2236737 18919911 ~ 18921444 (+) True G78743

Expression Profile