RNA id: TU97796



Basic Information


Item Value
RNA id TU97796
length 208
lncRNA type intronic
GC content 0.46
exon number 1
gene id G78392
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 17255222 ~ 17255429 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


agctaggaaacagaggggtttaaatactgtgtagcaaagagggtttgaactaggtgaatgaatgactaaccaatgacaggagaggaggacagaacaggtgcacctggaaggaaagaatgtggaagaactggttgaactggacaaaggaaaggagaagcactagagttagtattcgggagagggagacctcaggtggtgaactaaggta

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU97789 lncRNA upstream 13737 17239050 ~ 17241485 (+) True G78385
TU97785 lncRNA upstream 26377 17226891 ~ 17228845 (+) True G78381
TU97781 lncRNA upstream 33116 17220036 ~ 17222106 (+) True AMCG00010164
TU97728 lncRNA upstream 192310 17054873 ~ 17062912 (+) True G78334
TU97709 lncRNA upstream 362622 16892229 ~ 16892600 (+) True G78316
TU97971 lncRNA downstream 264838 17520267 ~ 17520854 (+) True G78529
TU97972 lncRNA downstream 264838 17520267 ~ 17520650 (+) False G78529
TU98002 lncRNA downstream 539011 17794440 ~ 17845546 (+) True G78546
TU98069 lncRNA downstream 720745 17976174 ~ 17977305 (+) True G78607
TU98099 lncRNA downstream 803290 18058719 ~ 18077267 (+) True G78635
AMCG00010160 mRNA upstream 8072 17245585 ~ 17247150 (+) True AMCG00010160
AMCG00010164 mRNA upstream 29884 17220036 ~ 17225338 (+) False AMCG00010164
AMCG00010163 mRNA upstream 61872 17187429 ~ 17193350 (+) True AMCG00010163
AMCG00010153 mRNA upstream 480507 16769582 ~ 16774715 (+) True AMCG00010153
AMCG00010154 mRNA upstream 493464 16757802 ~ 16761758 (+) True AMCG00010154
AMCG00010162 mRNA downstream 38638 17294067 ~ 17303416 (+) True AMCG00010162
AMCG00010161 mRNA downstream 49551 17304980 ~ 17311881 (+) True AMCG00010161
AMCG00010167 mRNA downstream 60116 17315545 ~ 17317008 (+) True AMCG00010167
AMCG00010166 mRNA downstream 61744 17317173 ~ 17334410 (+) True AMCG00010166
AMCG00010165 mRNA downstream 107742 17363171 ~ 17376938 (+) True AMCG00010165
TU97792 other upstream 8234 17245637 ~ 17246988 (+) False AMCG00010160
TU97783 other upstream 29882 17223882 ~ 17225340 (+) False AMCG00010164
TU97557 other upstream 1195135 16057531 ~ 16060087 (+) True G78198
TU97434 other upstream 1612381 15640961 ~ 15642841 (+) False AMCG00010119
TU96770 other upstream 5554141 11700706 ~ 11701081 (+) True G77541
TU97800 other downstream 18958 17274387 ~ 17277998 (+) True G78396
TU97819 other downstream 88990 17344419 ~ 17353488 (+) True G78410
TU98227 other downstream 1664482 18919911 ~ 18921444 (+) True G78743
TU98291 other downstream 1831900 19087329 ~ 19087754 (+) True G78794
TU98308 other downstream 1882574 19138003 ~ 19139647 (+) True AMCG00010216

Expression Profile