Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU98069 |
| length | 1132 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G78607 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 17976174 ~ 17977305 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0098655 | cation transmembrane transport | biological_process |
| GO:0098660 | inorganic ion transmembrane transport | biological_process |
| GO:0098662 | inorganic cation transmembrane transport | biological_process |
| GO:0006814 | sodium ion transport | biological_process |
| GO:0035725 | sodium ion transmembrane transport | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU98002 | lncRNA | upstream | 130628 | 17794440 ~ 17845546 (+) | True | G78546 |
| TU97971 | lncRNA | upstream | 455320 | 17520267 ~ 17520854 (+) | True | G78529 |
| TU97972 | lncRNA | upstream | 455524 | 17520267 ~ 17520650 (+) | False | G78529 |
| TU97796 | lncRNA | upstream | 720745 | 17255222 ~ 17255429 (+) | True | G78392 |
| TU97789 | lncRNA | upstream | 734689 | 17239050 ~ 17241485 (+) | True | G78385 |
| TU98099 | lncRNA | downstream | 81414 | 18058719 ~ 18077267 (+) | True | G78635 |
| TU98157 | lncRNA | downstream | 473185 | 18450490 ~ 18450809 (+) | True | G78682 |
| TU98243 | lncRNA | downstream | 986218 | 18963523 ~ 18963725 (+) | True | G78758 |
| TU98245 | lncRNA | downstream | 993990 | 18971295 ~ 18971714 (+) | True | G78760 |
| TU98257 | lncRNA | downstream | 1028984 | 19006289 ~ 19010099 (+) | True | G78772 |
| AMCG00010193 | mRNA | upstream | 2480 | 17969210 ~ 17973694 (+) | True | AMCG00010193 |
| AMCG00010191 | mRNA | upstream | 21630 | 17945232 ~ 17954544 (+) | True | AMCG00010191 |
| AMCG00010184 | mRNA | upstream | 154996 | 17800723 ~ 17821178 (+) | True | AMCG00010184 |
| AMCG00010185 | mRNA | upstream | 201487 | 17739134 ~ 17774687 (+) | True | AMCG00010185 |
| AMCG00010186 | mRNA | upstream | 251300 | 17713115 ~ 17724874 (+) | True | AMCG00010186 |
| AMCG00010194 | mRNA | downstream | 13483 | 17990788 ~ 17995377 (+) | True | AMCG00010194 |
| AMCG00010197 | mRNA | downstream | 28914 | 18006219 ~ 18009050 (+) | True | AMCG00010197 |
| AMCG00010192 | mRNA | downstream | 44387 | 18021692 ~ 18034151 (+) | True | AMCG00010192 |
| AMCG00010200 | mRNA | downstream | 193365 | 18170670 ~ 18177842 (+) | True | AMCG00010200 |
| AMCG00010199 | mRNA | downstream | 210873 | 18188178 ~ 18202438 (+) | True | AMCG00010199 |
| TU97819 | other | upstream | 622686 | 17344419 ~ 17353488 (+) | True | G78410 |
| TU97800 | other | upstream | 698176 | 17274387 ~ 17277998 (+) | True | G78396 |
| TU97792 | other | upstream | 729186 | 17245637 ~ 17246988 (+) | False | AMCG00010160 |
| TU97783 | other | upstream | 750834 | 17223882 ~ 17225340 (+) | False | AMCG00010164 |
| TU97557 | other | upstream | 1916087 | 16057531 ~ 16060087 (+) | True | G78198 |
| TU98227 | other | downstream | 942606 | 18919911 ~ 18921444 (+) | True | G78743 |
| TU98291 | other | downstream | 1110024 | 19087329 ~ 19087754 (+) | True | G78794 |
| TU98308 | other | downstream | 1160698 | 19138003 ~ 19139647 (+) | True | AMCG00010216 |
| TU98991 | other | downstream | 4068813 | 22046118 ~ 22047542 (+) | True | G79382 |
| TU99036 | other | downstream | 4380664 | 22357969 ~ 22378809 (+) | False | G79420 |
