RNA id: TU98243



Basic Information


Item Value
RNA id TU98243
length 203
lncRNA type inter_gene
GC content 0.64
exon number 1
gene id G78758
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 18963523 ~ 18963725 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CAGCAAGTCATACAGCTGCCCGCAGTAAATCTCGAAGAAGCTGATGCAGACGTGCAGCGCGGGGCGGCCGGGTGCCAACTCCCCCAGCTGCTTGAAGATGTCGCGGGCGGCCAGCGCATACAGGCCGGGGCTCCGTGCCGTTCCCATCATGGTGTGTGTCTTCCCTGCGCCCGTCTGCCCGTATGCGAAGCACGTGGCTTTAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU98157 lncRNA upstream 512714 18450490 ~ 18450809 (+) True G78682
TU98099 lncRNA upstream 886256 18058719 ~ 18077267 (+) True G78635
TU98069 lncRNA upstream 986218 17976174 ~ 17977305 (+) True G78607
TU98002 lncRNA upstream 1117977 17794440 ~ 17845546 (+) True G78546
TU97971 lncRNA upstream 1442669 17520267 ~ 17520854 (+) True G78529
TU98245 lncRNA downstream 7570 18971295 ~ 18971714 (+) True G78760
TU98257 lncRNA downstream 42564 19006289 ~ 19010099 (+) True G78772
TU98259 lncRNA downstream 42564 19006289 ~ 19009946 (+) False G78772
TU98262 lncRNA downstream 49677 19013402 ~ 19013758 (+) True G78774
TU98458 lncRNA downstream 526932 19490657 ~ 19494085 (+) True G78939
AMCG00010202 mRNA upstream 81732 18874762 ~ 18881791 (+) True AMCG00010202
AMCG00010203 mRNA upstream 97032 18851157 ~ 18866491 (+) True AMCG00010203
AMCG00010204 mRNA upstream 157705 18776456 ~ 18805818 (+) True AMCG00010204
AMCG00010201 mRNA upstream 278883 18678221 ~ 18684640 (+) True AMCG00010201
AMCG00010198 mRNA upstream 745150 18214015 ~ 18218373 (+) True AMCG00010198
AMCG00010212 mRNA downstream 107202 19070927 ~ 19080716 (+) True AMCG00010212
AMCG00010213 mRNA downstream 139143 19102868 ~ 19108097 (+) True AMCG00010213
AMCG00010214 mRNA downstream 153010 19116735 ~ 19119081 (+) True AMCG00010214
AMCG00010216 mRNA downstream 174934 19138659 ~ 19184069 (+) False AMCG00010216
AMCG00010218 mRNA downstream 226157 19189882 ~ 19229691 (+) True AMCG00010218
TU98227 other upstream 42079 18919911 ~ 18921444 (+) True G78743
TU97819 other upstream 1610035 17344419 ~ 17353488 (+) True G78410
TU97800 other upstream 1685525 17274387 ~ 17277998 (+) True G78396
TU97792 other upstream 1716535 17245637 ~ 17246988 (+) False AMCG00010160
TU97783 other upstream 1738183 17223882 ~ 17225340 (+) False AMCG00010164
TU98291 other downstream 123604 19087329 ~ 19087754 (+) True G78794
TU98308 other downstream 174278 19138003 ~ 19139647 (+) True AMCG00010216
TU98991 other downstream 3082393 22046118 ~ 22047542 (+) True G79382
TU99036 other downstream 3394244 22357969 ~ 22378809 (+) False G79420
TU99038 other downstream 3394244 22357969 ~ 22378809 (+) False G79420

Expression Profile