RNA id: TU98641



Basic Information


Item Value
RNA id TU98641
length 388
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G79091
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 20467309 ~ 20467696 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gatatatatacactcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattatctaaccaaccaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgagcgttgcatggttgttggtgccagacgggccggtctgagtatttcacaatctgctcagttactgggattttcacgcacaaccatttctagggtttacaaagaatggtgtgaaaagggaaaaacatccagtatgatGCTAGAGGTGAGGAGAATGGGCtgactgattcaagctgatagaagagcaactttgactgaaat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU98631 lncRNA upstream 184587 20282359 ~ 20282722 (+) True G79081
TU98500 lncRNA upstream 837870 19628726 ~ 19629439 (+) False AMCG00010224
TU98458 lncRNA upstream 973224 19490657 ~ 19494085 (+) True G78939
TU98262 lncRNA upstream 1453551 19013402 ~ 19013758 (+) True G78774
TU98257 lncRNA upstream 1457210 19006289 ~ 19010099 (+) True G78772
TU98660 lncRNA downstream 163516 20631212 ~ 20631454 (+) True G79109
TU98664 lncRNA downstream 189653 20657349 ~ 20657834 (+) True G79113
TU98670 lncRNA downstream 302303 20769999 ~ 20773081 (+) True G79118
TU98715 lncRNA downstream 520464 20988160 ~ 21000012 (+) True G79157
TU98738 lncRNA downstream 583120 21050816 ~ 21052576 (+) True G79178
AMCG00010235 mRNA upstream 264369 20193944 ~ 20202940 (+) True AMCG00010235
AMCG00010236 mRNA upstream 327031 20061249 ~ 20140278 (+) True AMCG00010236
AMCG00010231 mRNA upstream 448382 20006224 ~ 20018927 (+) True AMCG00010231
AMCG00010227 mRNA upstream 711231 19731874 ~ 19756078 (+) True AMCG00010227
AMCG00010228 mRNA upstream 745746 19711327 ~ 19721563 (+) True AMCG00010228
AMCG00010238 mRNA downstream 42968 20510664 ~ 20511173 (+) True AMCG00010238
AMCG00010237 mRNA downstream 43580 20511276 ~ 20511602 (+) True AMCG00010237
AMCG00010244 mRNA downstream 380075 20847771 ~ 20874164 (+) True AMCG00010244
AMCG00010243 mRNA downstream 430754 20898450 ~ 20924670 (+) True AMCG00010243
AMCG00010245 mRNA downstream 463635 20931331 ~ 20940964 (+) True AMCG00010245
TU98308 other upstream 1327662 19138003 ~ 19139647 (+) True AMCG00010216
TU98291 other upstream 1379555 19087329 ~ 19087754 (+) True G78794
TU98227 other upstream 1545865 18919911 ~ 18921444 (+) True G78743
TU97819 other upstream 3113821 17344419 ~ 17353488 (+) True G78410
TU97800 other upstream 3189311 17274387 ~ 17277998 (+) True G78396
TU98991 other downstream 1578422 22046118 ~ 22047542 (+) True G79382
TU99036 other downstream 1890273 22357969 ~ 22378809 (+) False G79420
TU99038 other downstream 1890273 22357969 ~ 22378809 (+) False G79420
TU99122 other downstream 2232046 22699742 ~ 22703374 (+) True G79475
TU99126 other downstream 2232113 22699809 ~ 22703409 (+) False G79475

Expression Profile