RNA id: TU99026


Basic Information

Item Value
RNA id TU99026
length 250
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G79414
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 22235015 ~ 22235264 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtcccactgttttctgccaattctgagctgatggcactgctggacatcttctgattgtgaagggaagtaagcatgatgtgtctttcatctgctgcagtaagtttccttggccgaccactgcgtctacggtcctcaacgttgcccgtttctttgtgcttcttcaaaagagcttggacagcacatctggaaacccctgtctgccttgaaatgtctgcctgggagagaccttgctgatgcagtataactacct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU99005 lncRNA upstream 163522 22069423 ~ 22071493 (+) True G79394
TU98989 lncRNA upstream 189221 22044633 ~ 22045794 (+) True G79380
TU98961 lncRNA upstream 224871 22007391 ~ 22010144 (+) True G79357
TU98959 lncRNA upstream 232350 22002343 ~ 22002665 (+) True G79355
TU98862 lncRNA upstream 602139 21629158 ~ 21632876 (+) True G79272
TU99027 lncRNA downstream 14367 22249631 ~ 22249832 (+) True G79415
TU99032 lncRNA downstream 122705 22357969 ~ 22361963 (+) True G79420
TU99046 lncRNA downstream 144499 22379763 ~ 22384132 (+) True G79427
TU99066 lncRNA downstream 240173 22475437 ~ 22475983 (+) True G79443
TU99124 lncRNA downstream 464478 22699742 ~ 22703043 (+) False G79475
AMCG00010272 mRNA upstream 138085 22079288 ~ 22096930 (+) True AMCG00010272
AMCG00010266 mRNA upstream 214057 22017684 ~ 22020958 (+) True AMCG00010266
AMCG00010261 mRNA upstream 348877 21880507 ~ 21886138 (+) True AMCG00010261
AMCG00010258 mRNA upstream 394112 21831125 ~ 21840903 (+) True AMCG00010258
AMCG00010260 mRNA upstream 408676 21791529 ~ 21826339 (+) True AMCG00010260
AMCG00010278 mRNA downstream 294866 22530130 ~ 22541832 (+) True AMCG00010278
AMCG00010279 mRNA downstream 415765 22651029 ~ 22694955 (+) True AMCG00010279
AMCG00010281 mRNA downstream 660656 22895920 ~ 22917724 (+) True AMCG00010281
AMCG00010283 mRNA downstream 769980 23005244 ~ 23044243 (+) True AMCG00010283
AMCG00010282 mRNA downstream 822356 23057620 ~ 23076233 (+) True AMCG00010282
TU98991 other upstream 187473 22046118 ~ 22047542 (+) True G79382
TU98308 other upstream 3095368 19138003 ~ 19139647 (+) True AMCG00010216
TU98291 other upstream 3147261 19087329 ~ 19087754 (+) True G78794
TU98227 other upstream 3313571 18919911 ~ 18921444 (+) True G78743
TU97819 other upstream 4881527 17344419 ~ 17353488 (+) True G78410
TU99036 other downstream 122705 22357969 ~ 22378809 (+) False G79420
TU99038 other downstream 122705 22357969 ~ 22378809 (+) False G79420
TU99122 other downstream 464478 22699742 ~ 22703374 (+) True G79475
TU99126 other downstream 464545 22699809 ~ 22703409 (+) False G79475
TU99599 other downstream 2597845 24833109 ~ 24837388 (+) True AMCG00010333

Expression Profile