RNA id: TU99165


Basic Information

Item Value
RNA id TU99165
length 266
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G79508
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 23088097 ~ 23088362 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TCTGTCTGATGGGCAGCTGCAGATACAGGCTGCCAGGGTGGCGCTGCCcagggaggtggagagagacCTGCCCATCGACAGCAGCCCTGCTGTGAAGACCCCGATGTCCCAGAGCTCACAGGGCCACCAGGAGGGAGCAGCCTCCTCCAGGGACTGAATTTATATATCATAATCTCTCTGAATCATGAGATttgatatgaaaacaaaacatttaaaattatatgagctttaattatcttttctaaATATGTAACCTTACACAAACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU99127 lncRNA upstream 382989 22704789 ~ 22705108 (+) True G79476
TU99124 lncRNA upstream 385054 22699742 ~ 22703043 (+) False G79475
TU99066 lncRNA upstream 612114 22475437 ~ 22475983 (+) True G79443
TU99046 lncRNA upstream 703965 22379763 ~ 22384132 (+) True G79427
TU99032 lncRNA upstream 726134 22357969 ~ 22361963 (+) True G79420
TU99166 lncRNA downstream 8229 23096591 ~ 23096838 (+) True G79509
TU99230 lncRNA downstream 97692 23186054 ~ 23188182 (+) True G79567
TU99239 lncRNA downstream 131175 23219537 ~ 23220917 (+) True G79572
TU99260 lncRNA downstream 227653 23316015 ~ 23326607 (+) False AMCG00010292
TU99268 lncRNA downstream 244902 23333264 ~ 23333473 (+) True G79596
AMCG00010282 mRNA upstream 11864 23057620 ~ 23076233 (+) True AMCG00010282
AMCG00010283 mRNA upstream 43854 23005244 ~ 23044243 (+) True AMCG00010283
AMCG00010281 mRNA upstream 170373 22895920 ~ 22917724 (+) True AMCG00010281
AMCG00010279 mRNA upstream 393142 22651029 ~ 22694955 (+) True AMCG00010279
AMCG00010278 mRNA upstream 546265 22530130 ~ 22541832 (+) True AMCG00010278
AMCG00010290 mRNA downstream 21749 23110111 ~ 23138342 (+) True AMCG00010290
AMCG00010291 mRNA downstream 52120 23140482 ~ 23157907 (+) True AMCG00010291
AMCG00010293 mRNA downstream 221147 23309509 ~ 23313460 (+) True AMCG00010293
AMCG00010292 mRNA downstream 227720 23316082 ~ 23329546 (+) True AMCG00010292
AMCG00010297 mRNA downstream 357755 23446117 ~ 23450175 (+) True AMCG00010297
TU99126 other upstream 384688 22699809 ~ 22703409 (+) False G79475
TU99122 other upstream 384723 22699742 ~ 22703374 (+) True G79475
TU99036 other upstream 709288 22357969 ~ 22378809 (+) False G79420
TU99038 other upstream 709288 22357969 ~ 22378809 (+) False G79420
TU98991 other upstream 1040555 22046118 ~ 22047542 (+) True G79382
TU99599 other downstream 1744747 24833109 ~ 24837388 (+) True AMCG00010333
TU99797 other downstream 2904196 25992558 ~ 25996414 (+) True AMCG00010366
TU99785 other downstream 2924122 26012484 ~ 26026303 (+) True G80014
TU99961 other downstream 3292105 26380467 ~ 26394522 (+) False AMCG00010369
TU100084 other downstream 4468053 27556415 ~ 27557007 (+) True G80249

Expression Profile