RNA id: TU99785



Basic Information


Item Value
RNA id TU99785
length 388
RNA type TUCP
GC content 0.47
exon number 3
gene id G80014
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 26012484 ~ 26026303 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTTTCATGGAGAGACTGGGAAACTGGATATTGTATCTTATCCATGACCTGCTGTTTTATGTGTGGACATTTTCAAAATGGGATACTTACTACAGTGAGATTATAGGGAAGCCCACCACATTCTGTGAGACCATGGGGAAGGCGGACATCTGGCTGATCCGTACCTACTGGGACTTCGAGTATCCTCGACCCTTTCTGCCCAACTTTCAGTTTGTAGGAGGACTTCACTGCAAACCAGCTAAGCCACTTCCAGAGGCCATGGAGGAGTTTGTGCAGAGGTCTGGAGATGACGGCATCGTGGTGTTCTCTCTCGGATCGATGATCAAGAATCTAACCAGCGAGAAAGCTAACATGATTGCTTCTGCTCTGGGACAAATAAAGCAGAAGGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU99709 lncRNA upstream 429909 25582318 ~ 25582575 (+) True G79952
TU99677 lncRNA upstream 1013987 24998294 ~ 24998497 (+) True G79924
TU99600 lncRNA upstream 1175096 24833109 ~ 24837388 (+) False AMCG00010333
TU99583 lncRNA upstream 1284727 24723834 ~ 24727757 (+) True G79849
TU99580 lncRNA upstream 1361852 24601132 ~ 24650632 (+) True G79846
TU99820 lncRNA downstream 100780 26127083 ~ 26127308 (+) True G80032
TU99958 lncRNA downstream 347349 26373652 ~ 26375356 (+) True G80138
TU99960 lncRNA downstream 378303 26404606 ~ 26409613 (+) True G80140
TU99991 lncRNA downstream 471466 26497769 ~ 26502274 (+) True G80163
TU100040 lncRNA downstream 889431 26915734 ~ 26916135 (+) True G80207
AMCG00010366 mRNA upstream 17328 25994821 ~ 25995156 (+) False AMCG00010366
AMCG00010358 mRNA upstream 26987 25976696 ~ 25985497 (+) True AMCG00010358
AMCG00010359 mRNA upstream 37624 25955754 ~ 25974860 (+) True AMCG00010359
AMCG00010356 mRNA upstream 77886 25929211 ~ 25934598 (+) True AMCG00010356
AMCG00010360 mRNA upstream 121876 25880615 ~ 25890608 (+) True AMCG00010360
AMCG00010362 mRNA downstream 16038 26042341 ~ 26057105 (+) True AMCG00010362
AMCG00010355 mRNA downstream 32845 26059148 ~ 26062893 (+) True AMCG00010355
AMCG00010354 mRNA downstream 42879 26069182 ~ 26080484 (+) True AMCG00010354
AMCG00010361 mRNA downstream 120422 26146725 ~ 26161931 (+) True AMCG00010361
AMCG00010357 mRNA downstream 280337 26306640 ~ 26328668 (+) True AMCG00010357
TU99797 other upstream 16070 25992558 ~ 25996414 (+) True AMCG00010366
TU99599 other upstream 1175096 24833109 ~ 24837388 (+) True AMCG00010333
TU99126 other upstream 3309075 22699809 ~ 22703409 (+) False G79475
TU99122 other upstream 3309110 22699742 ~ 22703374 (+) True G79475
TU99036 other upstream 3633675 22357969 ~ 22378809 (+) False G79420
TU99961 other downstream 354164 26380467 ~ 26394522 (+) False AMCG00010369
TU100084 other downstream 1530112 27556415 ~ 27557007 (+) True G80249
TU100109 other downstream 1843154 27869457 ~ 27874931 (+) False AMCG00010393
TU100171 other downstream 1880194 27906497 ~ 27906829 (+) True G80326
TU100533 other downstream 3468314 29494617 ~ 29503451 (+) False AMCG00010431

Expression Profile