RNA id: AMCG00010789


Basic Information

Item Value
RNA id AMCG00010789
length 444
RNA type mRNA
GC content 0.40
exon number 3
gene id AMCG00010789
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 30968 ~ 32166 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTATCGTAAACAGAACGCAGAGTACTGGATTACTGAATTTCACCGATTGCAAGCAAATGGTTGTTTTACTGGAGATGAGATTGACAAAGAATTAATGAGATTCTGCTTCCTACGCATAATTCAGGCAAATTTTCCCTACATTATTCCCAGACTAAATgatgAACTTGACACTTTTGTGACCCTGTGGAACAGGCATTACATCCGATCAACTCGTAATGAAAACGTTGTGCATGGCAAGCCGTTCCTGATGTACAATCTGCCTGAACTTTATGATACAATGGACTACCTGTGTGATGTTGACCCTGAGCGTATAGATGTTTGTTTACAAGCTAATGTCTGTATTTGGAAATCAGAAGTTCCTTGTAACAAAGATCTGTTTGAGCTGTGTGTCCTGTTCATGGATGAACACTATTTACAGCCTCCTGAAACTGCCACAGAAGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU127801 lncRNA downstream 102902 135068 ~ 135420 (+) True G102333
TU127809 lncRNA downstream 113779 145945 ~ 149673 (+) True G102340
TU127814 lncRNA downstream 121989 154155 ~ 156740 (+) True G102344
TU127831 lncRNA downstream 255225 287391 ~ 287691 (+) True G102359
TU127833 lncRNA downstream 255586 287752 ~ 287971 (+) True G102361
AMCG00010788 mRNA downstream 2983 35149 ~ 38223 (+) True AMCG00010788
AMCG00010800 mRNA downstream 883568 915734 ~ 925202 (+) True AMCG00010800
AMCG00010801 mRNA downstream 919357 951523 ~ 957231 (+) True AMCG00010801
AMCG00010803 mRNA downstream 945083 977249 ~ 1008155 (+) True AMCG00010803
AMCG00010805 mRNA downstream 980417 1012583 ~ 1028590 (+) True AMCG00010805
TU128036 other downstream 1758022 1790188 ~ 1791723 (+) True G102531
TU128040 other downstream 1766274 1798440 ~ 1800751 (+) True G102535
TU128102 other downstream 2019980 2052146 ~ 2056347 (+) False AMCG00010832
TU128108 other downstream 2038511 2070677 ~ 2073242 (+) False AMCG00010834
TU128109 other downstream 2038511 2070677 ~ 2073242 (+) False AMCG00010834

Expression Profile