RNA id: AMCG00010790


Basic Information

Item Value
RNA id AMCG00010790
length 363
RNA type mRNA
GC content 0.63
exon number 1
gene id AMCG00010790
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 133732 ~ 134094 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGGTGACCCACTCCATCAGAGAGCGCACCATCGCCGAGAACAGTCTGGTCATCCTGCTGCAGGGCATCCACGGCCAGGTCGCCACGGTGGACCTGAGGGACGAGAGTGTGGCCCGGGGCCGCGTCGTCAACGTGGACGCCTTCATGAATATCCGCCTGGAGGAGGTCGCGTACACGGACCGGCGCGGGAGGTTCAGCCGCCTGGCCGACCTCTTCGTCACCGGGAGGAATGTGAGGTACGTCCACATCCCGGACCAGGTGGACATCATCAAGACCGTGGAGAGCCAGCTGCAGAAGATCCACCGGGTCCGGCACTTCGGCGGGGACGGCAGGAAAGAGTATTTAACCAAGAAAAAGTGA

Function

GO: NA

KEGG:

id description

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU127800 lncRNA downstream 2150 131350 ~ 131582 (-) True G102332
TU127832 lncRNA upstream 153179 287273 ~ 287693 (-) True G102360
TU127834 lncRNA upstream 153655 287749 ~ 287971 (-) True G102362
TU127839 lncRNA upstream 353179 487273 ~ 487531 (-) True G102367
TU127844 lncRNA upstream 426340 560434 ~ 560797 (-) True G102372
TU127918 lncRNA upstream 831868 965962 ~ 966216 (-) True G102432
AMCG00010796 mRNA downstream 408 126979 ~ 133324 (-) True AMCG00010796
AMCG00010792 mRNA downstream 7133 114818 ~ 126599 (-) True AMCG00010792
AMCG00010795 mRNA downstream 21216 73277 ~ 112516 (-) True AMCG00010795
AMCG00010793 mRNA downstream 64137 43198 ~ 69595 (-) True AMCG00010793
AMCG00010794 mRNA upstream 2275 136369 ~ 149730 (-) True AMCG00010794
AMCG00010791 mRNA upstream 16980 151074 ~ 156797 (-) True AMCG00010791
AMCG00010797 mRNA upstream 23396 157490 ~ 193075 (-) True AMCG00010797
AMCG00010798 mRNA upstream 431137 565231 ~ 577174 (-) True AMCG00010798
AMCG00010799 mRNA upstream 453762 587856 ~ 629893 (-) True AMCG00010799
TU127810 other upstream 11851 145945 ~ 149829 (-) False AMCG00010794
TU127921 other upstream 841459 975553 ~ 978127 (-) True G102434
TU127939 other upstream 899827 1033921 ~ 1034874 (-) True AMCG00010806
TU128333 other upstream 2605722 2739816 ~ 2778023 (-) True G102762
TU128350 other upstream 2624384 2758478 ~ 2761264 (-) True G102774

Expression Profile