RNA id: AMCG00010819


Basic Information

Item Value
RNA id AMCG00010819
length 438
RNA type mRNA
GC content 0.53
exon number 3
gene id AMCG00010819
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 1166100 ~ 1209262 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAAGACATCCTCGGTGTATCTCTTCAGCAGCGATGACTTGCCCACCGTGGAGTCTCCCAGCATGATGATCCGAAACTGGTACTGCCACAGGGACTCCATGGCTTCTCCGGGGACCCGAGGAGCTGAGGAGCTGTCCCCCTCTCGCCAAACAAGAATGCCAGGAATTCCACGGAGCTTCTGCAAACCACGCCCTTACGTGACTgaatacctGGTCTTTATCCTTGGCTGCCATGGAGTTGGAGAATCCAGCTTTAATGACAATAAATCTGGACCAGTGTCTGACGAGAACGCAGACTGGATGGGAAGATTAGATGATGACATGTTGCTTTCAGACGTCCTCATCCCTGGAACCCACGACACCATGACTTTGCATGGCGGACACAGAGACTCTCACTACATCTCCTTCGCCGTGATGGCCTTTTCCAGTGTCATGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU127962 lncRNA downstream 5025 1156556 ~ 1161075 (-) True G102470
TU127958 lncRNA downstream 14711 1149434 ~ 1151389 (-) True G102466
TU127932 lncRNA downstream 157972 1005117 ~ 1008128 (-) True G102443
TU127919 lncRNA downstream 191459 974435 ~ 974641 (-) True G102433
TU127918 lncRNA downstream 199884 965962 ~ 966216 (-) True G102432
TU128003 lncRNA upstream 45458 1254720 ~ 1257986 (-) True G102498
TU128012 lncRNA upstream 206999 1416261 ~ 1459547 (-) True G102507
TU128024 lncRNA upstream 309113 1518375 ~ 1518699 (-) True G102519
TU128026 lncRNA upstream 338554 1547816 ~ 1548095 (-) True G102521
TU128030 lncRNA upstream 458776 1668038 ~ 1668284 (-) True G102525
AMCG00010813 mRNA downstream 29263 1132770 ~ 1136837 (-) True AMCG00010813
AMCG00010807 mRNA downstream 109179 1042001 ~ 1056921 (-) True AMCG00010807
AMCG00010806 mRNA downstream 131310 1033830 ~ 1034790 (-) False AMCG00010806
AMCG00010802 mRNA downstream 222634 935183 ~ 943466 (-) True AMCG00010802
AMCG00010799 mRNA downstream 536207 587856 ~ 629893 (-) True AMCG00010799
AMCG00010818 mRNA upstream 5143 1214405 ~ 1219326 (-) True AMCG00010818
AMCG00010817 mRNA upstream 12825 1222087 ~ 1242650 (-) True AMCG00010817
AMCG00010828 mRNA upstream 583515 1792777 ~ 1796592 (-) True AMCG00010828
AMCG00010829 mRNA upstream 588957 1798219 ~ 1800760 (-) True AMCG00010829
AMCG00010827 mRNA upstream 612389 1821651 ~ 1836885 (-) True AMCG00010827
TU127939 other downstream 131226 1033921 ~ 1034874 (-) True AMCG00010806
TU127921 other downstream 187973 975553 ~ 978127 (-) True G102434
TU127810 other downstream 1016271 145945 ~ 149829 (-) False AMCG00010794
TU128333 other upstream 1530554 2739816 ~ 2778023 (-) True G102762
TU128350 other upstream 1549216 2758478 ~ 2761264 (-) True G102774
TU128533 other upstream 1970708 3179970 ~ 3182619 (-) True G102902
TU128662 other upstream 2111551 3320813 ~ 3419176 (-) False G102990
TU128675 other upstream 2116596 3325858 ~ 3327559 (-) False AMCG00010895

Expression Profile