RNA id: AMCG00010931


Basic Information

Item Value
RNA id AMCG00010931
length 663
RNA type mRNA
GC content 0.61
exon number 2
gene id AMCG00010931
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 4978936 ~ 4981453 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGACTCAGACTCTCTCAGAAATTCGTGTTTTTGCTCTTTTTATCCGGGCTGGTAACTCTGTGCTTCGGGGCCCTGTTCTTCCTGCCGGACTCGGTGCGCTTGAAGCGGATCTTCCTCCCCCGGTCGGAGAGCCAGCCGCTGACCGTGGAGCCGGAGAATGATGAGGGGGAGCCGGGCAACAAGGGCGACAAGGACCACGACCATGTGCGGGGAATCACCCCAGCCAAGGGGGAGACGACCGCCAAAATGAAAGCGCCTGGCCGCAAATCCTATGCCACCAAGGATGCGAAAGCTGCGGAGAAGCCGGAGGACTGGAACCAGGCGCAGCCCAAGGCATCGGCGGTCAAGCCCGGGCTGGCGACCACCAGAGCGCAGCGGCGCGGCCAGGAGAAGGGGACCGTGTCCTCCAAGGGCAGCCAGCCCGCTTCCCCCTTTGATTACGAGAAGTTTAAGGGATGTCTCCTGAAACCGCCCCTGGGGACGGATAGAGGCAAGCCGAGCGATGTCCAGACACAGCAGCAGAGGGACAAAGTCAGAGAGGACTCTGAACGCAAGTCCACCTCCTCTGTGTCGTATCAGTCTCACGGCCAGCAACACTTACTGTCCTCTTCCTTTACCCGTGTGTGGAAGGCTCGGGAGCTGTCCTTCCCGACGCATTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU128853 lncRNA downstream 553364 4425354 ~ 4425572 (-) True G103149
TU128794 lncRNA downstream 826188 4152518 ~ 4152748 (-) True G103095
TU128793 lncRNA downstream 828019 4150499 ~ 4150917 (-) True G103094
TU128784 lncRNA downstream 839299 4138620 ~ 4139637 (-) True G103087
TU128741 lncRNA downstream 1194305 3784257 ~ 3784631 (-) True G103050
TU128989 lncRNA upstream 134262 5115715 ~ 5129141 (-) True AMCG00010937
TU128990 lncRNA upstream 134262 5115715 ~ 5124287 (-) False AMCG00010937
TU129052 lncRNA upstream 302877 5284330 ~ 5291900 (-) True AMCG00010946
TU129054 lncRNA upstream 350279 5331732 ~ 5334257 (-) True G103309
TU129082 lncRNA upstream 378522 5359975 ~ 5378226 (-) True G103329
AMCG00010932 mRNA downstream 81379 4894919 ~ 4897557 (-) True AMCG00010932
AMCG00010930 mRNA downstream 139877 4816733 ~ 4839059 (-) True AMCG00010930
AMCG00010927 mRNA downstream 242204 4723680 ~ 4736732 (-) True AMCG00010927
AMCG00010929 mRNA downstream 276486 4696019 ~ 4702450 (-) True AMCG00010929
AMCG00010928 mRNA downstream 287384 4661628 ~ 4691552 (-) True AMCG00010928
AMCG00010934 mRNA upstream 21433 5002886 ~ 5030530 (-) True AMCG00010934
AMCG00010940 mRNA upstream 115138 5096591 ~ 5103397 (-) True AMCG00010940
AMCG00010937 mRNA upstream 135769 5117222 ~ 5128684 (-) False AMCG00010937
AMCG00010939 mRNA upstream 152600 5134053 ~ 5140509 (-) True AMCG00010939
AMCG00010938 mRNA upstream 159771 5141224 ~ 5149261 (-) True AMCG00010938
TU128916 other downstream 328830 4642652 ~ 4650106 (-) True AMCG00010925
TU128814 other downstream 792962 4169793 ~ 4185974 (-) True G103112
TU128662 other downstream 1559760 3320813 ~ 3419176 (-) False G102990
TU128994 other upstream 152757 5134210 ~ 5140456 (-) False AMCG00010939
TU129184 other upstream 723317 5704770 ~ 5748564 (-) True G103395
TU129762 other upstream 2990171 7971624 ~ 8019522 (-) False G103832
TU129989 other upstream 3838098 8819551 ~ 8863666 (-) False AMCG00011051
TU129988 other upstream 3873452 8854905 ~ 8863666 (-) False AMCG00011051

Expression Profile