Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00011001 |
| length | 1122 |
| RNA type | mRNA |
| GC content | 0.57 |
| exon number | 4 |
| gene id | AMCG00011001 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 7190221 ~ 7199316 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006357 | regulation of transcription by RNA polymerase II | biological_process |
| GO:0016592 | mediator complex | cellular_component |
| id | description |
|---|---|
| K15135 | MED18; mediator of RNA polymerase II transcription subunit 18 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU129466 | lncRNA | upstream | 87032 | 7071433 ~ 7103189 (+) | False | AMCG00010994 |
| TU129446 | lncRNA | upstream | 228030 | 6961986 ~ 6962191 (+) | True | G103599 |
| TU129412 | lncRNA | upstream | 262974 | 6907102 ~ 6927247 (+) | True | G103567 |
| TU129372 | lncRNA | upstream | 553033 | 6636963 ~ 6637188 (+) | True | G103541 |
| TU129371 | lncRNA | upstream | 560231 | 6628488 ~ 6629990 (+) | True | G103540 |
| TU129549 | lncRNA | downstream | 109289 | 7308605 ~ 7309609 (+) | True | G103670 |
| TU129564 | lncRNA | downstream | 174359 | 7373675 ~ 7384727 (+) | True | G103684 |
| TU129571 | lncRNA | downstream | 190686 | 7390002 ~ 7452292 (+) | True | G103688 |
| TU129557 | lncRNA | downstream | 196312 | 7395628 ~ 7398120 (+) | True | G103678 |
| TU129582 | lncRNA | downstream | 257445 | 7456761 ~ 7461153 (+) | True | G103698 |
| AMCG00010998 | mRNA | upstream | 24953 | 7157490 ~ 7165268 (+) | True | AMCG00010998 |
| AMCG00010996 | mRNA | upstream | 41325 | 7144739 ~ 7148896 (+) | True | AMCG00010996 |
| AMCG00010995 | mRNA | upstream | 79280 | 7107285 ~ 7110941 (+) | True | AMCG00010995 |
| AMCG00010994 | mRNA | upstream | 86713 | 7088282 ~ 7103508 (+) | True | AMCG00010994 |
| AMCG00010993 | mRNA | upstream | 167298 | 7004083 ~ 7022923 (+) | True | AMCG00010993 |
| AMCG00011000 | mRNA | downstream | 3662 | 7202978 ~ 7203892 (+) | True | AMCG00011000 |
| AMCG00010999 | mRNA | downstream | 30054 | 7229370 ~ 7230701 (+) | True | AMCG00010999 |
| AMCG00011002 | mRNA | downstream | 71868 | 7271184 ~ 7286271 (+) | True | AMCG00011002 |
| AMCG00011004 | mRNA | downstream | 91955 | 7291271 ~ 7295876 (+) | True | AMCG00011004 |
| AMCG00011007 | mRNA | downstream | 355760 | 7555076 ~ 7559008 (+) | True | AMCG00011007 |
| TU129402 | other | upstream | 269290 | 6917766 ~ 6920931 (+) | False | AMCG00010990 |
| TU129373 | other | upstream | 547593 | 6641983 ~ 6642628 (+) | True | G103542 |
| TU128904 | other | upstream | 2547863 | 4638432 ~ 4642358 (+) | False | AMCG00010922 |
| TU128774 | other | upstream | 3106635 | 4049938 ~ 4083586 (+) | True | G103078 |
| TU128716 | other | upstream | 3609944 | 3577235 ~ 3580277 (+) | True | G103030 |
| TU129898 | other | downstream | 1349047 | 8548363 ~ 8552605 (+) | True | G103939 |
| TU130204 | other | downstream | 2331158 | 9530474 ~ 9533414 (+) | False | AMCG00011076 |
| TU130349 | other | downstream | 3619372 | 10818688 ~ 10819423 (+) | True | G104273 |
| TU130500 | other | downstream | 4466882 | 11666198 ~ 11671340 (+) | True | G104382 |
| TU130563 | other | downstream | 4609530 | 11808846 ~ 11810696 (+) | False | AMCG00011115 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000065_00869870_00870423.mRNA | True | 1986 | mRNA | 0.43 | 1 | CI01000065 | 868438 ~ 870423 (-) |
