RNA id: AMCG00011031


Basic Information

Item Value
RNA id AMCG00011031
length 444
RNA type mRNA
GC content 0.44
exon number 2
gene id AMCG00011031
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 8328395 ~ 8328942 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ACTATCAACACAATCAAACCATTTATCTCAAACAGAGACTGTTCCACTGTCATAAACGCCCTAGTAACATCCCTCCTTGACTATGTCAATGCCTTGTATGTCGGCTTGCCTCGATGTCGCACCAGACTGCTCCAGGGGATCCAAGACGCCTCTGCCCGTATCCTGAGCGGCATAACATGTCAGGACCTCATTAACCAAACTTTATTGGAACTGCATGAGTTAGCAGTAGAGCTTCGTGCTCAATTTAAACTACTCTGTAAAACCCACAAAGCCCTCCATCAACAGCTTTCCTCTTATCATTCGGGCAAATTGCAGGTTCACTGCCGTAGCAGGAATCtaattataataATCTGGAACACACTACTAGTTGAACTCCGTCTAACCTCCGAATTCCTTTCATTCCGTAAGAAACTCAACACATTTCTATTCTCCACGATACACTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU129839 lncRNA downstream 160471 8167695 ~ 8167924 (-) True G103893
TU129800 lncRNA downstream 271712 8056481 ~ 8056683 (-) True G103859
TU129760 lncRNA downstream 301364 7938137 ~ 8027031 (-) False G103832
TU129758 lncRNA downstream 353148 7970951 ~ 7975247 (-) True G103832
TU129712 lncRNA downstream 548454 7777008 ~ 7779941 (-) True G103794
TU129846 lncRNA upstream 12421 8341363 ~ 8341588 (-) True G103900
TU129849 lncRNA upstream 13642 8342584 ~ 8342818 (-) True G103903
TU129887 lncRNA upstream 131988 8460930 ~ 8462662 (-) True G103929
TU129971 lncRNA upstream 477528 8806470 ~ 8811022 (-) True G103999
TU129987 lncRNA upstream 517022 8845964 ~ 8849961 (-) False AMCG00011051
AMCG00011030 mRNA downstream 179234 8133029 ~ 8149161 (-) True AMCG00011030
AMCG00011027 mRNA downstream 207903 8109323 ~ 8120492 (-) True AMCG00011027
AMCG00011025 mRNA downstream 228780 8090961 ~ 8099615 (-) True AMCG00011025
AMCG00011024 mRNA downstream 238320 8082418 ~ 8090075 (-) True AMCG00011024
AMCG00011026 mRNA downstream 247420 8078378 ~ 8080975 (-) True AMCG00011026
AMCG00011035 mRNA upstream 35778 8364720 ~ 8380701 (-) True AMCG00011035
AMCG00011036 mRNA upstream 114373 8443315 ~ 8452241 (-) True AMCG00011036
AMCG00011034 mRNA upstream 134272 8463214 ~ 8464498 (-) True AMCG00011034
AMCG00011041 mRNA upstream 219891 8548833 ~ 8555531 (-) True AMCG00011041
AMCG00011040 mRNA upstream 249689 8578631 ~ 8582714 (-) True AMCG00011040
TU129762 other downstream 308873 7971624 ~ 8019522 (-) False G103832
TU129184 other downstream 2579831 5704770 ~ 5748564 (-) True G103395
TU128994 other downstream 3187939 5134210 ~ 5140456 (-) False AMCG00010939
TU128916 other downstream 3678289 4642652 ~ 4650106 (-) True AMCG00010925
TU128814 other downstream 4142421 4169793 ~ 4185974 (-) True G103112
TU129989 other upstream 490609 8819551 ~ 8863666 (-) False AMCG00011051
TU129988 other upstream 525963 8854905 ~ 8863666 (-) False AMCG00011051
TU130111 other upstream 905469 9234411 ~ 9236193 (-) False AMCG00011058
TU130252 other upstream 1272942 9601884 ~ 9602741 (-) False AMCG00011084
TU130270 other upstream 1412191 9741133 ~ 9743785 (-) True AMCG00011086