Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00011061 |
| length | 1200 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 11 |
| gene id | AMCG00011061 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 9299997 ~ 9309271 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0034220 | ion transmembrane transport | biological_process |
| GO:0015693 | magnesium ion transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0015095 | magnesium ion transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| K22733 | NIPA, SLC57A2S; magnesium transporter |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU130116 | lncRNA | downstream | 34510 | 9237791 ~ 9265487 (-) | True | G104098 |
| TU130052 | lncRNA | downstream | 334418 | 8965372 ~ 8965579 (-) | True | G104055 |
| TU130051 | lncRNA | downstream | 334716 | 8964717 ~ 8965281 (-) | True | G104054 |
| TU129987 | lncRNA | downstream | 450036 | 8845964 ~ 8849961 (-) | False | AMCG00011051 |
| TU129971 | lncRNA | downstream | 488975 | 8806470 ~ 8811022 (-) | True | G103999 |
| TU130156 | lncRNA | upstream | 101318 | 9410589 ~ 9412922 (-) | True | G104126 |
| TU130348 | lncRNA | upstream | 1414319 | 10723590 ~ 10723956 (-) | True | G104272 |
| TU130354 | lncRNA | upstream | 1636730 | 10946001 ~ 10946274 (-) | True | G104278 |
| TU130406 | lncRNA | upstream | 2106919 | 11416190 ~ 11420103 (-) | True | G104315 |
| TU130411 | lncRNA | upstream | 2111478 | 11420749 ~ 11426225 (-) | True | G104319 |
| AMCG00011060 | mRNA | downstream | 39183 | 9254133 ~ 9260814 (-) | True | AMCG00011060 |
| AMCG00011059 | mRNA | downstream | 50129 | 9239361 ~ 9249868 (-) | True | AMCG00011059 |
| AMCG00011058 | mRNA | downstream | 63769 | 9222268 ~ 9236228 (-) | True | AMCG00011058 |
| AMCG00011057 | mRNA | downstream | 99330 | 9187710 ~ 9200667 (-) | True | AMCG00011057 |
| AMCG00011054 | mRNA | downstream | 329225 | 8965817 ~ 8970772 (-) | True | AMCG00011054 |
| AMCG00011073 | mRNA | upstream | 105811 | 9415082 ~ 9423743 (-) | True | AMCG00011073 |
| AMCG00011068 | mRNA | upstream | 121315 | 9430586 ~ 9434597 (-) | True | AMCG00011068 |
| AMCG00011069 | mRNA | upstream | 129716 | 9438987 ~ 9444334 (-) | True | AMCG00011069 |
| AMCG00011070 | mRNA | upstream | 146620 | 9455891 ~ 9460295 (-) | True | AMCG00011070 |
| AMCG00011072 | mRNA | upstream | 159405 | 9468676 ~ 9473075 (-) | True | AMCG00011072 |
| TU130111 | other | downstream | 63804 | 9234411 ~ 9236193 (-) | False | AMCG00011058 |
| TU129989 | other | downstream | 436331 | 8819551 ~ 8863666 (-) | False | AMCG00011051 |
| TU129988 | other | downstream | 436331 | 8854905 ~ 8863666 (-) | False | AMCG00011051 |
| TU129762 | other | downstream | 1280475 | 7971624 ~ 8019522 (-) | False | G103832 |
| TU129184 | other | downstream | 3551433 | 5704770 ~ 5748564 (-) | True | G103395 |
| TU130252 | other | upstream | 292613 | 9601884 ~ 9602741 (-) | False | AMCG00011084 |
| TU130270 | other | upstream | 431862 | 9741133 ~ 9743785 (-) | True | AMCG00011086 |
| TU130712 | other | upstream | 2686142 | 11995413 ~ 11997786 (-) | False | AMCG00011140 |
| TU130749 | other | upstream | 2758194 | 12067465 ~ 12069079 (-) | False | AMCG00011135 |
| TU130831 | other | upstream | 3016826 | 12326097 ~ 12328282 (-) | True | G104629 |
