RNA id: AMCG00011097


Basic Information

Item Value
RNA id AMCG00011097
length 270
RNA type mRNA
GC content 0.51
exon number 5
gene id AMCG00011097
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 11039056 ~ 11093828 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCCGTCCGCGATGCGCCGTTTAAGAAGGAAACAATGATCCTCTTAAGCGACCAAAGCCTGGACATGAAAAATGGCTCTGATAATATGTTTACATCAGTTGAACTGTCACTGCTGGTGCAGCACATGTCACCCCGAGACACAGAGGCTCGAATTTTCTCACACACGAGGGACGGTACATGGATGCCGGAGTGTGTGGAGTGCAACCATGTCGAGGTCAACATCGCGCTGCTCCTGAGCAGAACGGCGTGGATCGCATCAGACAAATGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU130347 lncRNA upstream 315166 10723550 ~ 10723890 (+) True G104271
TU130328 lncRNA upstream 421860 10555729 ~ 10617196 (+) True G104255
TU130296 lncRNA upstream 767193 10269804 ~ 10271863 (+) False AMCG00011089
TU130278 lncRNA upstream 1166166 9872653 ~ 9872890 (+) True G104221
TU130260 lncRNA upstream 1292192 9693144 ~ 9746864 (+) True G104204
TU130396 lncRNA downstream 278726 11372554 ~ 11377085 (+) True G104307
TU130401 lncRNA downstream 324838 11418666 ~ 11420066 (+) True G104310
TU130425 lncRNA downstream 439092 11532920 ~ 11593994 (+) True G104326
TU130484 lncRNA downstream 550189 11644017 ~ 11651021 (+) True AMCG00011110
TU130570 lncRNA downstream 750582 11844410 ~ 11844623 (+) True G104443
AMCG00011094 mRNA upstream 387629 10640780 ~ 10651427 (+) True AMCG00011094
AMCG00011093 mRNA upstream 428174 10608957 ~ 10610882 (+) True AMCG00011093
AMCG00011095 mRNA upstream 435942 10601480 ~ 10603114 (+) True AMCG00011095
AMCG00011091 mRNA upstream 535590 10498477 ~ 10503466 (+) True AMCG00011091
AMCG00011089 mRNA upstream 768805 10203617 ~ 10270251 (+) True AMCG00011089
AMCG00011096 mRNA downstream 7 11093835 ~ 11124053 (+) True AMCG00011096
AMCG00011098 mRNA downstream 42888 11136716 ~ 11171971 (+) True AMCG00011098
AMCG00011099 mRNA downstream 126060 11219888 ~ 11252848 (+) True AMCG00011099
AMCG00011100 mRNA downstream 209236 11303064 ~ 11347011 (+) True AMCG00011100
AMCG00011101 mRNA downstream 258074 11351902 ~ 11369697 (+) True AMCG00011101
TU130349 other upstream 219633 10818688 ~ 10819423 (+) True G104273
TU130204 other upstream 1505642 9530474 ~ 9533414 (+) False AMCG00011076
TU129898 other upstream 2486451 8548363 ~ 8552605 (+) True G103939
TU129402 other upstream 4118125 6917766 ~ 6920931 (+) False AMCG00010990
TU129373 other upstream 4396428 6641983 ~ 6642628 (+) True G103542
TU130500 other downstream 572370 11666198 ~ 11671340 (+) True G104382
TU130563 other downstream 715018 11808846 ~ 11810696 (+) False AMCG00011115
TU130558 other downstream 748301 11842129 ~ 11844089 (+) True G104435
TU130727 other downstream 972666 12066494 ~ 12067337 (+) True G104550
TU130924 other downstream 1431532 12525360 ~ 12527031 (+) True G104694