Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00011102 |
| length | 1260 |
| RNA type | mRNA |
| GC content | 0.60 |
| exon number | 10 |
| gene id | AMCG00011102 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 11399849 ~ 11412952 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| id | description |
|---|---|
| K12486 | SMAP; stromal membrane-associated protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU130396 | lncRNA | upstream | 22764 | 11372554 ~ 11377085 (+) | True | G104307 |
| TU130347 | lncRNA | upstream | 675959 | 10723550 ~ 10723890 (+) | True | G104271 |
| TU130328 | lncRNA | upstream | 782653 | 10555729 ~ 10617196 (+) | True | G104255 |
| TU130296 | lncRNA | upstream | 1127986 | 10269804 ~ 10271863 (+) | False | AMCG00011089 |
| TU130278 | lncRNA | upstream | 1526959 | 9872653 ~ 9872890 (+) | True | G104221 |
| TU130401 | lncRNA | downstream | 5714 | 11418666 ~ 11420066 (+) | True | G104310 |
| TU130425 | lncRNA | downstream | 119968 | 11532920 ~ 11593994 (+) | True | G104326 |
| TU130484 | lncRNA | downstream | 231065 | 11644017 ~ 11651021 (+) | True | AMCG00011110 |
| TU130570 | lncRNA | downstream | 431458 | 11844410 ~ 11844623 (+) | True | G104443 |
| TU130571 | lncRNA | downstream | 431734 | 11844686 ~ 11845805 (+) | True | G104444 |
| AMCG00011101 | mRNA | upstream | 30152 | 11351902 ~ 11369697 (+) | True | AMCG00011101 |
| AMCG00011100 | mRNA | upstream | 52838 | 11303064 ~ 11347011 (+) | True | AMCG00011100 |
| AMCG00011099 | mRNA | upstream | 147001 | 11219888 ~ 11252848 (+) | True | AMCG00011099 |
| AMCG00011098 | mRNA | upstream | 227878 | 11136716 ~ 11171971 (+) | True | AMCG00011098 |
| AMCG00011096 | mRNA | upstream | 275796 | 11093835 ~ 11124053 (+) | True | AMCG00011096 |
| AMCG00011106 | mRNA | downstream | 59847 | 11472799 ~ 11490031 (+) | True | AMCG00011106 |
| AMCG00011109 | mRNA | downstream | 86613 | 11499565 ~ 11500270 (+) | True | AMCG00011109 |
| AMCG00011107 | mRNA | downstream | 114258 | 11527210 ~ 11530729 (+) | True | AMCG00011107 |
| AMCG00011105 | mRNA | downstream | 130036 | 11542988 ~ 11552978 (+) | True | AMCG00011105 |
| AMCG00011108 | mRNA | downstream | 161588 | 11574540 ~ 11587206 (+) | True | AMCG00011108 |
| TU130349 | other | upstream | 580426 | 10818688 ~ 10819423 (+) | True | G104273 |
| TU130204 | other | upstream | 1866435 | 9530474 ~ 9533414 (+) | False | AMCG00011076 |
| TU129898 | other | upstream | 2847244 | 8548363 ~ 8552605 (+) | True | G103939 |
| TU129402 | other | upstream | 4478918 | 6917766 ~ 6920931 (+) | False | AMCG00010990 |
| TU129373 | other | upstream | 4757221 | 6641983 ~ 6642628 (+) | True | G103542 |
| TU130500 | other | downstream | 253246 | 11666198 ~ 11671340 (+) | True | G104382 |
| TU130563 | other | downstream | 395894 | 11808846 ~ 11810696 (+) | False | AMCG00011115 |
| TU130558 | other | downstream | 429177 | 11842129 ~ 11844089 (+) | True | G104435 |
| TU130727 | other | downstream | 653542 | 12066494 ~ 12067337 (+) | True | G104550 |
| TU130924 | other | downstream | 1112408 | 12525360 ~ 12527031 (+) | True | G104694 |
