Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00011115 |
| length | 1010 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 3 |
| gene id | AMCG00011115 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 11808846 ~ 11810822 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0008137 | NADH dehydrogenase (ubiquinone) activity | molecular_function |
| id | description |
|---|---|
| K03938 | NDUFS5; NADH dehydrogenase (ubiquinone) Fe-S protein 5 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU130484 | lncRNA | upstream | 157887 | 11644017 ~ 11651021 (+) | True | AMCG00011110 |
| TU130425 | lncRNA | upstream | 214914 | 11532920 ~ 11593994 (+) | True | G104326 |
| TU130401 | lncRNA | upstream | 388842 | 11418666 ~ 11420066 (+) | True | G104310 |
| TU130396 | lncRNA | upstream | 431823 | 11372554 ~ 11377085 (+) | True | G104307 |
| TU130347 | lncRNA | upstream | 1085018 | 10723550 ~ 10723890 (+) | True | G104271 |
| TU130570 | lncRNA | downstream | 33588 | 11844410 ~ 11844623 (+) | True | G104443 |
| TU130571 | lncRNA | downstream | 33864 | 11844686 ~ 11845805 (+) | True | G104444 |
| TU130572 | lncRNA | downstream | 35166 | 11845988 ~ 11846253 (+) | True | G104445 |
| TU130632 | lncRNA | downstream | 103672 | 11914494 ~ 11917031 (+) | True | G104479 |
| TU130634 | lncRNA | downstream | 106866 | 11917688 ~ 11918147 (+) | True | G104480 |
| AMCG00011110 | mRNA | upstream | 159945 | 11644142 ~ 11648963 (+) | False | AMCG00011110 |
| AMCG00011111 | mRNA | upstream | 166681 | 11638002 ~ 11642227 (+) | True | AMCG00011111 |
| AMCG00011108 | mRNA | upstream | 221702 | 11574540 ~ 11587206 (+) | True | AMCG00011108 |
| AMCG00011105 | mRNA | upstream | 255930 | 11542988 ~ 11552978 (+) | True | AMCG00011105 |
| AMCG00011107 | mRNA | upstream | 278179 | 11527210 ~ 11530729 (+) | True | AMCG00011107 |
| AMCG00011116 | mRNA | downstream | 23022 | 11833844 ~ 11839029 (+) | True | AMCG00011116 |
| AMCG00011122 | mRNA | downstream | 132777 | 11943599 ~ 11946001 (+) | True | AMCG00011122 |
| AMCG00011121 | mRNA | downstream | 151576 | 11962398 ~ 11966995 (+) | True | AMCG00011121 |
| AMCG00011120 | mRNA | downstream | 176040 | 11986862 ~ 11988912 (+) | True | AMCG00011120 |
| AMCG00011133 | mRNA | downstream | 223475 | 12034297 ~ 12038373 (+) | True | AMCG00011133 |
| TU130500 | other | upstream | 137568 | 11666198 ~ 11671340 (+) | True | G104382 |
| TU130349 | other | upstream | 989485 | 10818688 ~ 10819423 (+) | True | G104273 |
| TU130204 | other | upstream | 2275494 | 9530474 ~ 9533414 (+) | False | AMCG00011076 |
| TU129898 | other | upstream | 3256303 | 8548363 ~ 8552605 (+) | True | G103939 |
| TU129402 | other | upstream | 4887977 | 6917766 ~ 6920931 (+) | False | AMCG00010990 |
| TU130558 | other | downstream | 31307 | 11842129 ~ 11844089 (+) | True | G104435 |
| TU130727 | other | downstream | 255672 | 12066494 ~ 12067337 (+) | True | G104550 |
| TU130924 | other | downstream | 714538 | 12525360 ~ 12527031 (+) | True | G104694 |
| TU130962 | other | downstream | 799307 | 12610129 ~ 12619055 (+) | True | G104719 |
| TU131073 | other | downstream | 1131558 | 12942380 ~ 12943082 (+) | True | G104815 |
