Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00011138 |
| length | 1371 |
| RNA type | mRNA |
| GC content | 0.60 |
| exon number | 5 |
| gene id | AMCG00011138 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 12004096 ~ 12008953 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0004649 | poly(ADP-ribose) glycohydrolase activity | molecular_function |
| id | description |
|---|---|
| K11687 | ADPRHL2; poly(ADP-ribose) glycohydrolase ARH3 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU130711 | lncRNA | downstream | 9757 | 11990829 ~ 11994339 (-) | True | AMCG00011140 |
| TU130682 | lncRNA | downstream | 25808 | 11977351 ~ 11978288 (-) | True | G104513 |
| TU130673 | lncRNA | downstream | 33094 | 11959238 ~ 11971002 (-) | True | AMCG00011125 |
| TU130580 | lncRNA | downstream | 307037 | 11663592 ~ 11697059 (-) | True | G104449 |
| TU130492 | lncRNA | downstream | 347263 | 11649005 ~ 11656833 (-) | True | G104376 |
| TU130718 | lncRNA | upstream | 30216 | 12039169 ~ 12039376 (-) | True | G104545 |
| TU130755 | lncRNA | upstream | 67775 | 12076728 ~ 12144122 (-) | True | G104568 |
| TU130781 | lncRNA | upstream | 127015 | 12135968 ~ 12142015 (-) | True | G104591 |
| TU130789 | lncRNA | upstream | 147489 | 12156442 ~ 12156731 (-) | True | G104598 |
| TU130874 | lncRNA | upstream | 366114 | 12375067 ~ 12379667 (-) | True | G104660 |
| AMCG00011140 | mRNA | downstream | 8162 | 11992239 ~ 11995934 (-) | False | AMCG00011140 |
| AMCG00011129 | mRNA | downstream | 19288 | 11978953 ~ 11984808 (-) | True | AMCG00011129 |
| AMCG00011125 | mRNA | downstream | 33861 | 11967369 ~ 11970235 (-) | False | AMCG00011125 |
| AMCG00011128 | mRNA | downstream | 45788 | 11952116 ~ 11958308 (-) | True | AMCG00011128 |
| AMCG00011131 | mRNA | downstream | 53096 | 11948240 ~ 11951000 (-) | True | AMCG00011131 |
| AMCG00011137 | mRNA | upstream | 6200 | 12015153 ~ 12033399 (-) | True | AMCG00011137 |
| AMCG00011139 | mRNA | upstream | 44685 | 12053638 ~ 12059625 (-) | True | AMCG00011139 |
| AMCG00011135 | mRNA | upstream | 57542 | 12066495 ~ 12069075 (-) | True | AMCG00011135 |
| AMCG00011136 | mRNA | upstream | 62714 | 12071667 ~ 12085428 (-) | True | AMCG00011136 |
| AMCG00011150 | mRNA | upstream | 256554 | 12265507 ~ 12275549 (-) | True | AMCG00011150 |
| TU130712 | other | downstream | 6310 | 11995413 ~ 11997786 (-) | False | AMCG00011140 |
| TU130270 | other | downstream | 2260311 | 9741133 ~ 9743785 (-) | True | AMCG00011086 |
| TU130252 | other | downstream | 2401355 | 9601884 ~ 9602741 (-) | False | AMCG00011084 |
| TU130111 | other | downstream | 2767903 | 9234411 ~ 9236193 (-) | False | AMCG00011058 |
| TU129989 | other | downstream | 3140430 | 8819551 ~ 8863666 (-) | False | AMCG00011051 |
| TU130749 | other | upstream | 58512 | 12067465 ~ 12069079 (-) | False | AMCG00011135 |
| TU130831 | other | upstream | 317144 | 12326097 ~ 12328282 (-) | True | G104629 |
| TU130897 | other | upstream | 426918 | 12435871 ~ 12457327 (-) | True | AMCG00011152 |
| TU130955 | other | upstream | 539336 | 12548289 ~ 12548993 (-) | True | G104715 |
| TU130995 | other | upstream | 625903 | 12634856 ~ 12640227 (-) | True | G104749 |
