RNA id: AMCG00011186



Basic Information


Item Value
RNA id AMCG00011186
length 867
RNA type mRNA
GC content 0.49
exon number 4
gene id AMCG00011186
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 13328382 ~ 13330598 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTTGTTGATTTTGCCTGCGCTGTTGCTGAGTTTTCAAGTCTTGTTTCCAGTCCTCGTTCTAGAAGTCAACCTGGAGGCCAGCCCCTCATCCCAGGTGCAGCTTACCTGTGGCCTGTCCTACCAGGGTCAGGATATCCACTGGAAGAAGGAGAACCGAGCCCTGGGACAGCGTGGCAACCAGATCACTGTCACCATTGTGGAGATGTCTGGTGGCAATTTCACCTGCCACCAGCACAGCTTGGGTGCCGTCCTCAACCACACGCTGGTGCTGGTGCAGGAGAGACAGAACAAGAAAGGAGAGTTTCCCAAAACCATTCTGAAGGGGGCGCTCCAGAGCCAGAGGAGTGGAGGAGAAAACTTCATAAAGTGCCAGGCAAAAAACTATAATGGAGACTTCGAGTGTTCATGGGACCTGGTGGTGGAGCCCGATGATGTTATGCTCTCTGTCAGCGCTGAGCGTGTTGGATCTTCCAATGGGAGTAGCATCTCCTGTATTGTTAATGGAGAGAAGAAAGGGAATGCAACCTGCCTAGACTCATCCTTCTGTCCATACAGTGAAGAAATGGACCGCATAAACTTAACAGTTTACGCCATTCATGAGTACCGCTTTGAATCATATTCCAGGGACTTCTACATCACTGAAATTGTGAAACCTGATAAACCTGCCGACTTCAAGATCAACTGCAGCAAGCAATATGTGTGGGCTTATCCTCCGACATGGAATCAGCCACACTCCTATTTCCCTCTGACCTTCCAAGTCCGACAAGCAAAACACAACTGTGACAGCCTGGAGGTCAAGACAGACATGGTAACGCAACCACTGCTTCAGCAATGTATACAATTTTATCATAGAGTGGACATATAG

Function


GO: NA

KEGG:

id description
K05425 IL12B; interleukin 12B

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU131175 lncRNA upstream 98966 13186948 ~ 13229416 (+) True G104883
TU131100 lncRNA upstream 309318 13018792 ~ 13019064 (+) True G104835
TU131072 lncRNA upstream 388212 12935436 ~ 12940170 (+) True G104814
TU131054 lncRNA upstream 497102 12830849 ~ 12831280 (+) True G104800
TU130967 lncRNA upstream 653311 12670376 ~ 12675071 (+) False AMCG00011163
TU131203 lncRNA downstream 222803 13553401 ~ 13555056 (+) True G104910
TU131220 lncRNA downstream 335349 13665947 ~ 13679380 (+) True G104923
TU131222 lncRNA downstream 335349 13665947 ~ 13679380 (+) False G104923
TU131310 lncRNA downstream 527233 13857831 ~ 13858192 (+) True G104979
TU131311 lncRNA downstream 528053 13858651 ~ 13858982 (+) True G104980
AMCG00011187 mRNA upstream 13673 13285297 ~ 13314709 (+) True AMCG00011187
AMCG00011184 mRNA upstream 112468 13190779 ~ 13215914 (+) True AMCG00011184
AMCG00011181 mRNA upstream 159233 13156251 ~ 13169149 (+) True AMCG00011181
AMCG00011177 mRNA upstream 323955 12999534 ~ 13004427 (+) True AMCG00011177
AMCG00011172 mRNA upstream 366597 12960213 ~ 12961785 (+) True AMCG00011172
AMCG00011185 mRNA downstream 17966 13348564 ~ 13367027 (+) True AMCG00011185
AMCG00011189 mRNA downstream 45993 13376591 ~ 13379795 (+) True AMCG00011189
AMCG00011192 mRNA downstream 157348 13487946 ~ 13492456 (+) True AMCG00011192
AMCG00011191 mRNA downstream 172037 13502635 ~ 13505520 (+) True AMCG00011191
AMCG00011190 mRNA downstream 207650 13538248 ~ 13544283 (+) True AMCG00011190
TU131073 other upstream 385300 12942380 ~ 12943082 (+) True G104815
TU130962 other upstream 709327 12610129 ~ 12619055 (+) True G104719
TU130924 other upstream 801351 12525360 ~ 12527031 (+) True G104694
TU130727 other upstream 1261045 12066494 ~ 12067337 (+) True G104550
TU130558 other upstream 1484293 11842129 ~ 11844089 (+) True G104435
TU131514 other downstream 1289092 14619690 ~ 14620534 (+) True G105139
TU131632 other downstream 1990182 15320780 ~ 15322425 (+) False AMCG00011241
TU131792 other downstream 2520048 15850646 ~ 15852389 (+) True AMCG00011253
TU131793 other downstream 2523166 15853764 ~ 15855784 (+) True AMCG00011252
TU131803 other downstream 2632742 15963340 ~ 15984079 (+) True G105373

Expression Profile