RNA id: AMCG00011200


Basic Information

Item Value
RNA id AMCG00011200
length 1308
RNA type mRNA
GC content 0.66
exon number 1
gene id AMCG00011200
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 13743918 ~ 13745225 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGATAAGTTACCGATGTTAAACTCTAACGCCAGTGCTGGGAACAGCTCCGTGCTCTTGCGCTCCTTCCTGGAAGACGGCGGACACGCCTACTTGGAATCCCAGGAGCTGAGGGTCCTCATCCCGGCCATCTTGGGGGTGGTCTGCGTCCTGGGGTTTGTCTGCAACATCACCGCTATGGGCGTGCTGGTGGCCAACGCTCGTAAGGGGAAGCTGTCTCTCATCAACTCCCTGATCCTCAACCTCACGCTGGCCGACGGGCTGGTCCTGGCCTTCGCTGTGCCCTTTAAGGCGGCCGCCTACTCCCGGGCCAGCTGGACACTCGGCTGGCTGGTGTGCAAGACCTGCGACTGGTTCCTGCACTCCTGCATGTCCGCCAAGAGCTTCACCGTCGCCGTCATGGCCAAGGCCTGCTTCAGGTACGTCAGCAACCCCACCAAGCAGGTCGCCATTCAGTACCGGACCATCCTGGCCATCCTGCTGCTGTGCTGGGGGCTGGCCTGCGTGCTGCCCGCACCCCTCTGGCTCTTCGCCGCCCTGCGCAGGGAAGGCAGCAGCCTCTGGTGCGTGCAGGCCGTGCCTCCCTCGGCCCGGGACTTCATGGCTGTGTACGTCAAGGTGTACCCCCTGCTGGCCTACTGCGGGCCCTTGAGCGTGGCGCTACTGTACTTCTGGAGGGCCTACGGGAGGTGCCAGCGCAGGGGCACCAAGACGCAGAACCTGAGGACCCAGATTCGCTCCCGCAGGCTGACCGTCATGCTGCTGAGCCTCACCCTGACCTCGGCCACCCTCTGGCTGCCAGAGTGGGTGTCGTGGGTGTGGAGTCGGCACGCGGCGGCAGCTGCGCCCAACAAGGGCCCCCCTCCCCCGCCGCTGCTGTTCGTGCTCTGTGCCCAGGTGCTCATGCTGTCCATCTCCCTGGTCAACCCGCTGGTGGTCCTGTCCATGTCCGAGGAGTTCCGCGAGGGCTACCTGGGCCTGTGGCGCCGCCTGACCCTGCAGAAGCACCAGCCCACATCCAAGACCCAGGGGCCCCACGCCGCTACAGCACCCCGGCCCCCCAGCCCCCGGCCCGAGGGCCCCGCCCACAGCCCCGCGCCGCCCATGGAGGATCCGGATGCCGCAGTCGAGatgcaggaggagagagagagcggcaAGGGCTCAGACAGCCCTGGCAACAAGGACGGTATCCACCTGCCCGACCTGGAGCAGTTCTGGCATGAGCGAGAGGCCGGCAGCAGCAACCAGGAAAACGACCCTGTGCCCTGGGAGCACCAGGACCCTGCAGAGGTCAAGGCAAAATCGtaa

Function

GO: NA

KEGG:

id description
K08435 GPR151; G protein-coupled receptor 151

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU131246 lncRNA downstream 64656 13665795 ~ 13679262 (-) False G104929
TU131241 lncRNA downstream 76202 13662186 ~ 13667716 (-) True G104928
TU131214 lncRNA downstream 188844 13553440 ~ 13555074 (-) True G104921
TU131209 lncRNA downstream 365619 13378057 ~ 13378299 (-) True G104916
TU131208 lncRNA downstream 366921 13376133 ~ 13376997 (-) True G104915
TU131342 lncRNA upstream 119296 13864521 ~ 13867615 (-) True G104998
TU131407 lncRNA upstream 320116 14065341 ~ 14065908 (-) True G105048
TU131411 lncRNA upstream 325179 14070404 ~ 14070969 (-) True G105052
TU131436 lncRNA upstream 453602 14198827 ~ 14203536 (-) True G105077
TU131442 lncRNA upstream 473730 14218955 ~ 14261910 (-) True G105080
AMCG00011194 mRNA downstream 56214 13684634 ~ 13687704 (-) True AMCG00011194
AMCG00011188 mRNA downstream 400454 13328493 ~ 13343464 (-) True AMCG00011188
AMCG00011183 mRNA downstream 551778 13186948 ~ 13192140 (-) True AMCG00011183
AMCG00011182 mRNA downstream 639363 13056733 ~ 13104555 (-) True AMCG00011182
AMCG00011179 mRNA downstream 709799 13019906 ~ 13034119 (-) True AMCG00011179
AMCG00011198 mRNA upstream 7328 13752553 ~ 13778757 (-) True AMCG00011198
AMCG00011203 mRNA upstream 111632 13856857 ~ 13858270 (-) True AMCG00011203
AMCG00011208 mRNA upstream 174443 13919668 ~ 13922667 (-) True AMCG00011208
AMCG00011207 mRNA upstream 194134 13939359 ~ 13946548 (-) True AMCG00011207
AMCG00011211 mRNA upstream 248758 13993983 ~ 13996350 (-) False AMCG00011211
TU131247 other downstream 64656 13676131 ~ 13679262 (-) True G104929
TU131202 other downstream 376844 13365083 ~ 13367074 (-) True G104909
TU131118 other downstream 799777 12943141 ~ 12944141 (-) False AMCG00011174
TU131119 other downstream 800836 12942391 ~ 12943082 (-) False AMCG00011174
TU130995 other downstream 1103691 12634856 ~ 12640227 (-) True G104749
TU131382 other upstream 250975 13996200 ~ 13996589 (-) True AMCG00011211
TU131409 other upstream 321990 14067215 ~ 14068561 (-) True G105050
TU131692 other upstream 1625177 15370402 ~ 15373179 (-) True G105290
TU131737 other upstream 1754309 15499534 ~ 15502133 (-) True AMCG00011251
TU131862 other upstream 2218113 15963338 ~ 15973872 (-) False AMCG00011259

Expression Profile


Homologous

species RNA id representative length rna type GC content exon number chromosome id location
zebrafish (Danio rerio) TCONS_00015934 True 1257 mRNA 0.58 1 NC_007125.7 52520204 ~ 52521460 (-)