RNA id: AMCG00011203



Basic Information


Item Value
RNA id AMCG00011203
length 696
RNA type mRNA
GC content 0.64
exon number 2
gene id AMCG00011203
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 13856857 ~ 13858270 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGATGCTATGCACGTCCTGCCCACTATAAAGCACTGCTTTTTGTCCCCTGTCCCCCTGTCCCCTCGGCTCCAGCTGCTGGTGGTTGTCCTCCTGCTGTCCGCGGCGCTGGTGCTGCTGGCGGAGTCCCGGGAGCGGCGCAAGGACGGCCGGGCAGCGCGCAAGAGGCCCGGGCGCGTCAAGGACAAGAGCGCCCCACCGGGACGCCAAAACGGCACCCTGTTCAACATCTCCCCGGACCCGGTCCTGGCGGGGGTGAAGCCGGTGGTGGACCTGGCGACGGGCGAGACGCAGCCGGCTTGGGAGGAAGACTACGAGAAGAGCATCGGCGATATGGTGGCGCAAGTGCTGAACAACTCGGCGTTGTCCAAGAACAAGTGTGCGGTGGACCGGCGCCTGTGGATGTCCAACACCCGCAGTCTGTCTCCCTGGTCGTACAGCATCAACCACGACGAGAACCGCATCCCGGTGGACATTCCCGAAGCCCAGTGCTCATGCGCCGGCTGCATCAACCCCTTCACCATGCAGGAGGACCGCACCATGAACAGCGTGCCCATCTACACCAAGATCCCCGTGCGCAGGCTGCTGTGCGACAAGAGGGGCAAGAAGccgaggaggaagaagaagaagaagtgcGGCACGGAGTACAGGACAGTGGTGGAGTACATCGCGGTGGGCTGCACCTGTATTGTCTGA

Function


GO: NA

KEGG:

id description
K05490 IL17B, CX1; interleukin 17B

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU131246 lncRNA downstream 177595 13665795 ~ 13679262 (-) False G104929
TU131241 lncRNA downstream 189141 13662186 ~ 13667716 (-) True G104928
TU131214 lncRNA downstream 301783 13553440 ~ 13555074 (-) True G104921
TU131209 lncRNA downstream 478558 13378057 ~ 13378299 (-) True G104916
TU131208 lncRNA downstream 479860 13376133 ~ 13376997 (-) True G104915
TU131342 lncRNA upstream 6251 13864521 ~ 13867615 (-) True G104998
TU131407 lncRNA upstream 207071 14065341 ~ 14065908 (-) True G105048
TU131411 lncRNA upstream 212134 14070404 ~ 14070969 (-) True G105052
TU131436 lncRNA upstream 340557 14198827 ~ 14203536 (-) True G105077
TU131442 lncRNA upstream 360685 14218955 ~ 14261910 (-) True G105080
AMCG00011198 mRNA downstream 78100 13752553 ~ 13778757 (-) True AMCG00011198
AMCG00011200 mRNA downstream 111632 13743918 ~ 13745225 (-) True AMCG00011200
AMCG00011194 mRNA downstream 169153 13684634 ~ 13687704 (-) True AMCG00011194
AMCG00011188 mRNA downstream 513393 13328493 ~ 13343464 (-) True AMCG00011188
AMCG00011183 mRNA downstream 664717 13186948 ~ 13192140 (-) True AMCG00011183
AMCG00011208 mRNA upstream 61398 13919668 ~ 13922667 (-) True AMCG00011208
AMCG00011207 mRNA upstream 81089 13939359 ~ 13946548 (-) True AMCG00011207
AMCG00011211 mRNA upstream 135713 13993983 ~ 13996350 (-) False AMCG00011211
AMCG00011216 mRNA upstream 353355 14211625 ~ 14340740 (-) True AMCG00011216
AMCG00011222 mRNA upstream 606887 14465157 ~ 14467077 (-) True AMCG00011222
TU131247 other downstream 177595 13676131 ~ 13679262 (-) True G104929
TU131202 other downstream 489783 13365083 ~ 13367074 (-) True G104909
TU131118 other downstream 912716 12943141 ~ 12944141 (-) False AMCG00011174
TU131119 other downstream 913775 12942391 ~ 12943082 (-) False AMCG00011174
TU130995 other downstream 1216630 12634856 ~ 12640227 (-) True G104749
TU131382 other upstream 137930 13996200 ~ 13996589 (-) True AMCG00011211
TU131409 other upstream 208945 14067215 ~ 14068561 (-) True G105050
TU131692 other upstream 1512132 15370402 ~ 15373179 (-) True G105290
TU131737 other upstream 1641264 15499534 ~ 15502133 (-) True AMCG00011251
TU131862 other upstream 2105068 15963338 ~ 15973872 (-) False AMCG00011259

Expression Profile