RNA id: TU131382



Basic Information


Item Value
RNA id TU131382
length 259
RNA type TUCP
GC content 0.58
exon number 2
gene id AMCG00011211
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 13993983 ~ 13996589 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CAGGACTCATGGGACTTGTAGTCTTTCTAGATTAAGCTGTCTGTTTACCCGGAAGTGTGAAAAAACTACAGATCCCAGATTGCTCTTCAGGTCGCCGAGCTCTGAGGGATGGCCGAGGGCAGCGGCGGTGCGGCTAATCTGCCGCCTGGAGACCCGCAGCTCATAGGCCTCATCGTGCAGCACCTCAAGAGCCGGGGCCTCTTCGACGAGTTCCGCAGGGACTGTCTGGCCGATGTCGACACAAAGGTGAGCTGGTGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU131342 lncRNA downstream 128585 13864521 ~ 13867615 (-) True G104998
TU131246 lncRNA downstream 316938 13665795 ~ 13679262 (-) False G104929
TU131241 lncRNA downstream 328484 13662186 ~ 13667716 (-) True G104928
TU131214 lncRNA downstream 441126 13553440 ~ 13555074 (-) True G104921
TU131209 lncRNA downstream 617901 13378057 ~ 13378299 (-) True G104916
TU131407 lncRNA upstream 68752 14065341 ~ 14065908 (-) True G105048
TU131411 lncRNA upstream 73815 14070404 ~ 14070969 (-) True G105052
TU131436 lncRNA upstream 202238 14198827 ~ 14203536 (-) True G105077
TU131442 lncRNA upstream 222366 14218955 ~ 14261910 (-) True G105080
TU131467 lncRNA upstream 423112 14419701 ~ 14420053 (-) True G105105
AMCG00011207 mRNA downstream 49652 13939359 ~ 13946548 (-) True AMCG00011207
AMCG00011208 mRNA downstream 73533 13919668 ~ 13922667 (-) True AMCG00011208
AMCG00011203 mRNA downstream 137930 13856857 ~ 13858270 (-) True AMCG00011203
AMCG00011198 mRNA downstream 217443 13752553 ~ 13778757 (-) True AMCG00011198
AMCG00011200 mRNA downstream 250975 13743918 ~ 13745225 (-) True AMCG00011200
AMCG00011216 mRNA upstream 215036 14211625 ~ 14340740 (-) True AMCG00011216
AMCG00011222 mRNA upstream 468568 14465157 ~ 14467077 (-) True AMCG00011222
AMCG00011223 mRNA upstream 485781 14482370 ~ 14489581 (-) True AMCG00011223
AMCG00011230 mRNA upstream 549482 14546071 ~ 14576028 (-) True AMCG00011230
AMCG00011231 mRNA upstream 652789 14649378 ~ 14676424 (-) True AMCG00011231
TU131247 other downstream 316938 13676131 ~ 13679262 (-) True G104929
TU131202 other downstream 629126 13365083 ~ 13367074 (-) True G104909
TU131118 other downstream 1052059 12943141 ~ 12944141 (-) False AMCG00011174
TU131119 other downstream 1053118 12942391 ~ 12943082 (-) False AMCG00011174
TU130995 other downstream 1355973 12634856 ~ 12640227 (-) True G104749
TU131409 other upstream 70626 14067215 ~ 14068561 (-) True G105050
TU131692 other upstream 1373813 15370402 ~ 15373179 (-) True G105290
TU131737 other upstream 1502945 15499534 ~ 15502133 (-) True AMCG00011251
TU131862 other upstream 1966749 15963338 ~ 15973872 (-) False AMCG00011259
TU131861 other upstream 1966863 15963452 ~ 15973872 (-) False AMCG00011259

Expression Profile