RNA id: AMCG00011212



Basic Information


Item Value
RNA id AMCG00011212
length 360
RNA type mRNA
GC content 0.44
exon number 2
gene id AMCG00011212
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 14072368 ~ 14076417 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTGAAGTACTGGGGATTTGTGAAGATGGTGAAATTGGGGAGTAATTTACATGACAAAGGCACCAAAGCGGCCAGCGTCGAGGATGGCTTTCAGAACGTCCCGCTGATCACGCCGCTGGACGTCAATCACCTGCAGTACCCCGCCCCCGACAAGGTTGTTGTTAAAACAAGAACTGAGTACCAGACGGACCAAAAAAATAAGGGCAAACTGAAGGTGCCAAAGATTGAAGAATTCACCATCAGCTTCAACGATGGCGTGTCAGAAAGACTGAAGGTAGGATTCCAATTTTcagctgaaataataaaattaaaaacacacaaggtGCAGATGTATgttgaatttgaaaaatatattgtgtaa

Function


GO:

id name namespace
GO:0009987 cellular process biological_process

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU131410 lncRNA upstream 1399 14070400 ~ 14070969 (+) True G105051
TU131405 lncRNA upstream 9211 14062700 ~ 14063157 (+) True G105046
TU131391 lncRNA upstream 11344 14013121 ~ 14061024 (+) False AMCG00011209
TU131374 lncRNA upstream 79523 13990955 ~ 13992845 (+) True AMCG00011210
TU131317 lncRNA upstream 196190 13868402 ~ 13876178 (+) False AMCG00011204
TU131438 lncRNA downstream 142533 14218950 ~ 14262016 (+) True G105078
TU131476 lncRNA downstream 379685 14456102 ~ 14459018 (+) True G105113
TU131518 lncRNA downstream 588203 14664620 ~ 14665153 (+) True G105143
TU131519 lncRNA downstream 594302 14670719 ~ 14670928 (+) True G105144
TU131520 lncRNA downstream 594881 14671298 ~ 14671549 (+) True G105145
AMCG00011209 mRNA upstream 11341 14037104 ~ 14061027 (+) True AMCG00011209
AMCG00011210 mRNA upstream 80441 13985665 ~ 13991927 (+) False AMCG00011210
AMCG00011206 mRNA upstream 158182 13909732 ~ 13914186 (+) True AMCG00011206
AMCG00011205 mRNA upstream 172330 13891754 ~ 13900038 (+) True AMCG00011205
AMCG00011204 mRNA upstream 194086 13868337 ~ 13878282 (+) True AMCG00011204
AMCG00011213 mRNA downstream 18738 14095155 ~ 14096053 (+) True AMCG00011213
AMCG00011214 mRNA downstream 120118 14196535 ~ 14196906 (+) True AMCG00011214
AMCG00011217 mRNA downstream 211339 14287756 ~ 14305622 (+) True AMCG00011217
AMCG00011215 mRNA downstream 290023 14366440 ~ 14379806 (+) True AMCG00011215
AMCG00011219 mRNA downstream 320365 14396782 ~ 14411016 (+) True AMCG00011219
TU131073 other upstream 1129286 12942380 ~ 12943082 (+) True G104815
TU130962 other upstream 1453313 12610129 ~ 12619055 (+) True G104719
TU130924 other upstream 1545337 12525360 ~ 12527031 (+) True G104694
TU130727 other upstream 2005031 12066494 ~ 12067337 (+) True G104550
TU130558 other upstream 2228279 11842129 ~ 11844089 (+) True G104435
TU131514 other downstream 543273 14619690 ~ 14620534 (+) True G105139
TU131632 other downstream 1244363 15320780 ~ 15322425 (+) False AMCG00011241
TU131792 other downstream 1774229 15850646 ~ 15852389 (+) True AMCG00011253
TU131793 other downstream 1777347 15853764 ~ 15855784 (+) True AMCG00011252
TU131803 other downstream 1886923 15963340 ~ 15984079 (+) True G105373

Expression Profile