RNA id: AMCG00011238


Basic Information

Item Value
RNA id AMCG00011238
length 857
RNA type mRNA
GC content 0.51
exon number 6
gene id AMCG00011238
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 15235625 ~ 15238725 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TCCAGATAAAGATGATTGACACCGCAGTGGGATCAGAAGCCTTACCTTTCCATGTCCAGTTGAAGACTCTTCTGGACCAGGAGTCCAGATACCAGCCCAAGCTGTGTGGGTTGAGGATCATCGAGGCCGCTCACGACAATGGCCTGAGGATGACCACGAGTCTGAGGGACTTTGAAGTGAGGGATCTGTTATCTTTGTCCCGGTTCTTCGGCTTCAGCGCGGAGACCTTCTCTCTGGCAGTCCAGCCAAAGCACCTGTCCTGCGTGGGCCTGTGCTGTTTCTACATCGCTGTGAAATCGGCAGAAGACGAGCGCAACGTTCCCTTGGCCACAGATTTAATCCGGATCAGTCAGCACCGGTTCACGGTCTCGGACATGATGAGGATGGAGAAGATCATCCTGGAGAAGCTCTACTGGAAGGTGAAAGCCACCACGGCCCTACATTTCCTCAGGCTCTATCATGTGCACATCGTTGAGCAGTTGGCCACAGAGAGAAAGTGGCTGAACGTGGATCGACTGGAAGCCCAGCTGAAAGCGTGTCATTGCTCTTTCGCCTTCTCCAAAATAAAGCCCTCTCTTCTTGCTCTGGCTATAATTGCCTTAGAAATCCAAGAGCAAAGCCTTCATGAAGTGACTGAAGTGCTGCAGGATCTACAACAGCATTGCAATATCAAAGAGGGGGACTTGATCTGTGCGAGAGAGCTGGTGGCAAAATGCCTGGCTGAGTATTCCTCGACGAAGTGTACCAAGCCAAATAACCAGAAACTGAGATGGATTGTGTCGGGAAGGACTGCAAGACAGCTGAAGCATAGCTACTATAGGATCACTCATCTTCCAACGATTCCTGAAGCTGCTTAT

Function

GO: NA

KEGG:

id description
K10145 CCNG1; cyclin G1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU131604 lncRNA downstream 116192 15119207 ~ 15119433 (-) True G105221
TU131596 lncRNA downstream 180808 15054416 ~ 15054817 (-) True G105213
TU131570 lncRNA downstream 306576 14928801 ~ 14929049 (-) True G105187
TU131557 lncRNA downstream 346188 14889226 ~ 14889437 (-) True G105176
TU131475 lncRNA downstream 785844 14447338 ~ 14449781 (-) True G105112
TU131651 lncRNA upstream 59920 15298645 ~ 15322712 (-) True G105261
TU131695 lncRNA upstream 134622 15373347 ~ 15374763 (-) True G105291
TU131679 lncRNA upstream 146991 15385716 ~ 15404233 (-) True G105282
TU131703 lncRNA upstream 153007 15391732 ~ 15396392 (-) True G105298
TU131742 lncRNA upstream 296645 15535370 ~ 15569124 (-) True G105326
AMCG00011239 mRNA downstream 105582 15080384 ~ 15130043 (-) True AMCG00011239
AMCG00011233 mRNA downstream 345320 14884434 ~ 14890305 (-) True AMCG00011233
AMCG00011232 mRNA downstream 401983 14823524 ~ 14833642 (-) True AMCG00011232
AMCG00011229 mRNA downstream 534196 14688179 ~ 14701429 (-) True AMCG00011229
AMCG00011231 mRNA downstream 559201 14649378 ~ 14676424 (-) True AMCG00011231
AMCG00011237 mRNA upstream 8467 15247192 ~ 15272628 (-) True AMCG00011237
AMCG00011245 mRNA upstream 43852 15282577 ~ 15295505 (-) True AMCG00011245
AMCG00011246 mRNA upstream 89611 15328336 ~ 15346964 (-) True AMCG00011246
AMCG00011244 mRNA upstream 122591 15361316 ~ 15364890 (-) True AMCG00011244
AMCG00011248 mRNA upstream 204465 15443190 ~ 15444125 (-) True AMCG00011248
TU131409 other downstream 1167064 14067215 ~ 14068561 (-) True G105050
TU131382 other downstream 1239036 13996200 ~ 13996589 (-) True AMCG00011211
TU131247 other downstream 1556363 13676131 ~ 13679262 (-) True G104929
TU131202 other downstream 1868551 13365083 ~ 13367074 (-) True G104909
TU131118 other downstream 2291484 12943141 ~ 12944141 (-) False AMCG00011174
TU131692 other upstream 131677 15370402 ~ 15373179 (-) True G105290
TU131737 other upstream 260809 15499534 ~ 15502133 (-) True AMCG00011251
TU131862 other upstream 724613 15963338 ~ 15973872 (-) False AMCG00011259
TU131861 other upstream 724727 15963452 ~ 15973872 (-) False AMCG00011259
TU132119 other upstream 1719456 16958181 ~ 16961069 (-) False AMCG00011290

Expression Profile