RNA id: AMCG00011252



Basic Information


Item Value
RNA id AMCG00011252
length 626
RNA type mRNA
GC content 0.42
exon number 4
gene id AMCG00011252
representative False

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 15853764 ~ 15855784 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GAAAGATTGTCTTAACAGAACGAACTGCataaacaagagagagagagagagagatggactgCAAACTtgcaatttttgttttgatggCAGTGTGCACTGCATCTGCTGTGGACCTAGGCTCCAGTCGTTCCCGTTGTCTGTGCACCAGTATATCACAGGGTGTACCCATCAGACTGATCGTCAAGGTGGAAATCATTGCCAGGAGCAACAGCTGCGAGAACACAGAGATAATAGCCATCCTGAGAAACGGAAGGCGGCGGTGCCTGGATCCCGCCACTGCCAAAGTGCAGAACGTCCTGAGTCGGCTGGTGGAGAGgaaaaaggcaaaacatttttcacCTACAAGTCCTTCTCAAGAAGTCCAACACTAATTGATCCAGGAAGATTCGCACGAAGATTTCCATTTTATCTGCTAGTGTAAAACAATCCGCTTGGTCACCTTCCACCTTAAACAGAGAAATGTGCAGTGTTATAAAGCTAAATATAGCCCTTGTCAtttcaataatgttttatatattttttacaatttgttagtatatttcccttttctgtgATGTAGAAATGTCTTCATTTCATAACACTGTCTATATATCACTGAGATTTTTTGTTATTGCAATACTTTTTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU131789 lncRNA upstream 14781 15821308 ~ 15839105 (+) True G105365
TU131713 lncRNA upstream 366514 15472259 ~ 15487372 (+) True AMCG00011250
TU131624 lncRNA upstream 570138 15280455 ~ 15283748 (+) True G105238
TU131609 lncRNA upstream 597264 15249738 ~ 15256622 (+) True G105226
TU131569 lncRNA upstream 924946 14928643 ~ 14928940 (+) True G105186
TU131797 lncRNA downstream 4041 15859758 ~ 15861690 (+) True G105370
TU131795 lncRNA downstream 7315 15863032 ~ 15872654 (+) False AMCG00011255
TU131796 lncRNA downstream 7315 15863032 ~ 15872654 (+) False AMCG00011255
TU131802 lncRNA downstream 122972 15978689 ~ 15984079 (+) False G105373
TU131821 lncRNA downstream 140660 15996377 ~ 15997732 (+) True G105390
AMCG00011253 mRNA upstream 1502 15850701 ~ 15852384 (+) False AMCG00011253
AMCG00011256 mRNA upstream 27317 15825613 ~ 15826569 (+) True AMCG00011256
AMCG00011254 mRNA upstream 54393 15755286 ~ 15799493 (+) True AMCG00011254
AMCG00011257 mRNA upstream 189845 15649737 ~ 15664041 (+) True AMCG00011257
AMCG00011249 mRNA upstream 288030 15556848 ~ 15565856 (+) True AMCG00011249
AMCG00011255 mRNA downstream 7322 15863039 ~ 15873489 (+) True AMCG00011255
AMCG00011258 mRNA downstream 92922 15948639 ~ 15953777 (+) True AMCG00011258
AMCG00011262 mRNA downstream 175357 16031074 ~ 16033025 (+) True AMCG00011262
AMCG00011268 mRNA downstream 249933 16105650 ~ 16106386 (+) False AMCG00011268
AMCG00011270 mRNA downstream 264151 16119868 ~ 16124691 (+) True AMCG00011270
TU131792 other upstream 1497 15850646 ~ 15852389 (+) True AMCG00011253
TU131632 other upstream 531461 15320780 ~ 15322425 (+) False AMCG00011241
TU131514 other upstream 1233352 14619690 ~ 14620534 (+) True G105139
TU131073 other upstream 2910804 12942380 ~ 12943082 (+) True G104815
TU130962 other upstream 3234831 12610129 ~ 12619055 (+) True G104719
TU131803 other downstream 107623 15963340 ~ 15984079 (+) True G105373
TU132132 other downstream 1122775 16978492 ~ 16982241 (+) True AMCG00011293
TU132321 other downstream 1928446 17784163 ~ 17788050 (+) True G105778
TU132460 other downstream 3257193 19112910 ~ 19117369 (+) True AMCG00011328
TU132491 other downstream 3366338 19222055 ~ 19222421 (+) True G105916

Expression Profile