RNA id: AMCG00011257



Basic Information


Item Value
RNA id AMCG00011257
length 588
RNA type mRNA
GC content 0.55
exon number 3
gene id AMCG00011257
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 15649737 ~ 15664041 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGATCTCGCGCCCGGACTGGCGACCCTCGTGCTGGTGCCCCTCTTCCTGCACGCCCACGGCCTGTACATCGGCGCTGGCAAAGATTCACTCCAGGGGTTGCTTGGAGAGTATGGAGTCGTGACACCGATCAGCACGGACGCTGATGGCCGGTTCTTGTCCCGTGACTTGTCGGCTGATAATGGACGTAGGCGCTGGAAAAGGGATTCCACTGAGGGTCCCAGGGACAGGCTCTTCTACAATGTCACGGTGTTTGGGAGGGAGTTTCACCTGAGGCTCAGGCTGAACTCGCGCCTGGTGGCACCGGGAGCTAAGATTGAGTGGCAGGAGGATAGTAACCGGACACGCTCGGAGCCTTTACATGCAGATTGCCTCTATGTTGGAGATGTCACAGACATGGAAGGGGCTACTGTTGCCATAAGCAACTGTGATGGTCTGTGTTATTCTTACAGCACGTGGAAAAAGTGTAAACCCTTGGCTCGAAGAATTAACAGCCTCACCGTGGCAGACAAAGTGTTTGAGGTCCACAGTCATCCCGGGGGCTTCTATTACACAGCCATGGCAGAGATCGAGGCATGGGGTGattaa

Function


GO:

id name namespace
GO:0040007 growth biological_process

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU131713 lncRNA upstream 162365 15472259 ~ 15487372 (+) True AMCG00011250
TU131624 lncRNA upstream 365989 15280455 ~ 15283748 (+) True G105238
TU131609 lncRNA upstream 393115 15249738 ~ 15256622 (+) True G105226
TU131569 lncRNA upstream 720797 14928643 ~ 14928940 (+) True G105186
TU131520 lncRNA upstream 978188 14671298 ~ 14671549 (+) True G105145
TU131789 lncRNA downstream 157267 15821308 ~ 15839105 (+) True G105365
TU131797 lncRNA downstream 195717 15859758 ~ 15861690 (+) True G105370
TU131795 lncRNA downstream 198991 15863032 ~ 15872654 (+) False AMCG00011255
TU131796 lncRNA downstream 198991 15863032 ~ 15872654 (+) False AMCG00011255
TU131802 lncRNA downstream 314648 15978689 ~ 15984079 (+) False G105373
AMCG00011249 mRNA upstream 83881 15556848 ~ 15565856 (+) True AMCG00011249
AMCG00011250 mRNA upstream 168749 15475139 ~ 15480988 (+) False AMCG00011250
AMCG00011247 mRNA upstream 245515 15389603 ~ 15404222 (+) True AMCG00011247
AMCG00011242 mRNA upstream 268136 15377266 ~ 15381601 (+) True AMCG00011242
AMCG00011243 mRNA upstream 274869 15365147 ~ 15374868 (+) True AMCG00011243
AMCG00011254 mRNA downstream 91245 15755286 ~ 15799493 (+) True AMCG00011254
AMCG00011256 mRNA downstream 161572 15825613 ~ 15826569 (+) True AMCG00011256
AMCG00011253 mRNA downstream 186660 15850701 ~ 15852384 (+) False AMCG00011253
AMCG00011252 mRNA downstream 189845 15853886 ~ 15855717 (+) False AMCG00011252
AMCG00011255 mRNA downstream 198998 15863039 ~ 15873489 (+) True AMCG00011255
TU131632 other upstream 327312 15320780 ~ 15322425 (+) False AMCG00011241
TU131514 other upstream 1029203 14619690 ~ 14620534 (+) True G105139
TU131073 other upstream 2706655 12942380 ~ 12943082 (+) True G104815
TU130962 other upstream 3030682 12610129 ~ 12619055 (+) True G104719
TU130924 other upstream 3122706 12525360 ~ 12527031 (+) True G104694
TU131792 other downstream 186605 15850646 ~ 15852389 (+) True AMCG00011253
TU131793 other downstream 189723 15853764 ~ 15855784 (+) True AMCG00011252
TU131803 other downstream 299299 15963340 ~ 15984079 (+) True G105373
TU132132 other downstream 1314451 16978492 ~ 16982241 (+) True AMCG00011293
TU132321 other downstream 2120122 17784163 ~ 17788050 (+) True G105778

Expression Profile