RNA id: AMCG00011278



Basic Information


Item Value
RNA id AMCG00011278
length 311
RNA type mRNA
GC content 0.46
exon number 2
gene id AMCG00011278
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 16426014 ~ 16427017 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gtGACACCTGCACAATGGCAGACTACAATAGACTAAAAAACATGCTTCTGGATCTGCAGTCCAGAAACTTCAATCAAGGGGGGAATGTCCAAGAAAACCGCATGTCCCAGCGGAGGTTTCTAGTGGAGAAGATGTTTAAGTACTTGGATATCAACAATGATGGGCATCTAGGCAGTGACGAACTGGCTCAGATATCAATGAGAGATCACCTGGATGATGACCTTCTCGAGTGCACCATGCAGGACCTGCTCAGATATGATGATTATAACAACGACGGTCACCTGACTCTCCAGGAATTCTACACTGCGTTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU131909 lncRNA upstream 225715 16200049 ~ 16200299 (+) True G105466
TU131891 lncRNA upstream 293027 16132758 ~ 16132987 (+) True G105448
TU131886 lncRNA upstream 315633 16105586 ~ 16110381 (+) True AMCG00011268
TU131881 lncRNA upstream 358572 16067233 ~ 16067442 (+) True G105438
TU131879 lncRNA upstream 362265 16062914 ~ 16063749 (+) True G105436
TU131997 lncRNA downstream 297671 16724688 ~ 16725153 (+) True G105538
TU132204 lncRNA downstream 882742 17309759 ~ 17312068 (+) True G105684
TU132235 lncRNA downstream 951603 17378620 ~ 17378860 (+) True G105715
TU132287 lncRNA downstream 1307973 17734990 ~ 17742387 (+) True G105756
TU132310 lncRNA downstream 1324233 17751250 ~ 17751484 (+) True G105769
AMCG00011275 mRNA upstream 178930 16243327 ~ 16247084 (+) True AMCG00011275
AMCG00011276 mRNA upstream 185264 16233605 ~ 16240750 (+) True AMCG00011276
AMCG00011267 mRNA upstream 277100 16143839 ~ 16148914 (+) True AMCG00011267
AMCG00011269 mRNA upstream 284509 16133452 ~ 16141505 (+) True AMCG00011269
AMCG00011270 mRNA upstream 301323 16119868 ~ 16124691 (+) True AMCG00011270
AMCG00011277 mRNA downstream 26053 16453070 ~ 16471261 (+) True AMCG00011277
AMCG00011280 mRNA downstream 279310 16706327 ~ 16712776 (+) True AMCG00011280
AMCG00011285 mRNA downstream 321214 16748231 ~ 16755779 (+) True AMCG00011285
AMCG00011289 mRNA downstream 400159 16827176 ~ 16842696 (+) True AMCG00011289
AMCG00011287 mRNA downstream 438350 16865367 ~ 16894925 (+) True AMCG00011287
TU131803 other upstream 441935 15963340 ~ 15984079 (+) True G105373
TU131793 other upstream 570230 15853764 ~ 15855784 (+) True AMCG00011252
TU131792 other upstream 573625 15850646 ~ 15852389 (+) True AMCG00011253
TU131632 other upstream 1103589 15320780 ~ 15322425 (+) False AMCG00011241
TU131514 other upstream 1805480 14619690 ~ 14620534 (+) True G105139
TU132132 other downstream 551475 16978492 ~ 16982241 (+) True AMCG00011293
TU132321 other downstream 1357146 17784163 ~ 17788050 (+) True G105778
TU132460 other downstream 2685893 19112910 ~ 19117369 (+) True AMCG00011328
TU132491 other downstream 2795038 19222055 ~ 19222421 (+) True G105916
TU132810 other downstream 3668212 20095229 ~ 20162966 (+) False G106139

Expression Profile