RNA id: AMCG00011316


Basic Information

Item Value
RNA id AMCG00011316
length 1371
RNA type mRNA
GC content 0.49
exon number 9
gene id AMCG00011316
representative False

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 18180646 ~ 18191195 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGACCTCCTGTCCTGCCCGCTGTGCCAGGCTGTGCTGTTCGAGCCGGTGACCGTGTCCTGCGGCCACTCCTTCTGCAAGAGATGCGTGGGGACGGGTCTGCCTTCCAAGTGCCACATATGCAAAGAGAGGTTAAAACTAAGGGACGTGAAACATGTCAGAAATAACGTTGTGCTGTTTAGTATCATTGAAAAATGCTACCCAGAAGAGACCAAACTGAAGTGCCATTTGCAGGACTTACTTAAAAACTGCGAGTTTACAGCAGCTCTACGGATTGCAGACGAAGGACTGGAACTGGCACCTAATGATGTCAGTCTGCGAATGTCAAGGGCAGAAGCCAACATGGGACTACAGTGCTTTACTGACGTACTGGAAGATCTGGATGTATTATGTAAAACACGGCCCACGTGGACTGAGgGTTACTTTCGAAAAGGGAATGTATTTGTGGAAATGGGACAAAAATCAGAGGCTTTGATTCAGTATCATCACTGTCTCCGACTACAATTGGAATGTGCTCCTGCCAAACAACAGATACAGAAGATACTGAACACAGATGGTGTCCCCATTCCTGAGGATATTGAAGACTTACTCAAAGTCGTCTCAATCCATATGAGAAACTCTAGCCCAGCAACAAGCTCTATGAACACTGTGAGTGAAAGCACTCATCTGGCCCAGCTCCTGGAAGTGGAGAGCAAGCAGCTTGCGGAAAGGAAACAAGTTCATGAAGCTGAGATAGCTGAGCTTTCAAAtttaacaaaGAATATTCCCATCTTTGTGTGTACGGTGGCCTACCCTGGAGTTCCTTGTCCTCTGCACATATTTGAACCCCGGTACCGGCTTATGATGCGCAGGTGTATGGAGATTGGCACAAAGAAGTTTGGCATGTGCACCTATGAACATGGCAAAGGGTTTGCAGACTATGGTTGTATTTTAGAGATCTTGGGTTTGGATCTCCTTCCTGATGGCAGATCCTACGTCGACACAGTAGGAGGGAGCCGCTTTCGAGTCCTCAAAAGAGGCCAGAGAGATGGCTACCATACAGCAGATATAGAGTACATTGAAGATCAAAAAGTGGAAGGAGCAGAGCTGGAGCTTGTACAGTGTATGCATGACAGCATTTACCAGCAAGCCCATGACTGGTACCACCGACTGAATGATAGAATCCAGGACCAGATCAGCAAGCAGTACGGCCCCATGCCCAACAGGGAGGATGATATTCAGGCTTCCCCCAATGGGCCTTCCTGGTGTTGGTGGCTGCTGTCAGTGCTGCAGCTGGACCCTGCCTACCAGACCACCGTGCTGTCCCTGACATCCCTCAAGGACAGGCTGGGGCACATTCGCATTGTTCTGGAGTACTTCTCACAGAGCTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU132341 lncRNA downstream 147501 18032755 ~ 18033145 (-) True G105795
TU132332 lncRNA downstream 182921 17997438 ~ 17997725 (-) True G105787
TU132331 lncRNA downstream 373717 17806679 ~ 17806929 (-) True G105786
TU132326 lncRNA downstream 380359 17797443 ~ 17800287 (-) True G105782
TU132315 lncRNA downstream 424888 17754327 ~ 17755758 (-) True G105774
TU132399 lncRNA upstream 50079 18240676 ~ 18244145 (-) True G105840
TU132422 lncRNA upstream 426252 18616849 ~ 18617084 (-) True G105859
TU132493 lncRNA upstream 1043125 19233722 ~ 19244483 (-) True G105918
TU132565 lncRNA upstream 1185916 19376513 ~ 19376908 (-) True G105967
TU132567 lncRNA upstream 1206196 19396793 ~ 19469364 (-) True G105968
AMCG00011314 mRNA downstream 387140 17786920 ~ 17793506 (-) True AMCG00011314
AMCG00011315 mRNA downstream 394804 17784040 ~ 17785842 (-) True AMCG00011315
AMCG00011311 mRNA downstream 407481 17761910 ~ 17773165 (-) True AMCG00011311
AMCG00011313 mRNA downstream 430997 17717626 ~ 17749649 (-) False AMCG00011313
AMCG00011303 mRNA downstream 727878 17434502 ~ 17452768 (-) True AMCG00011303
AMCG00011318 mRNA upstream 5944 18196541 ~ 18197251 (-) True AMCG00011318
AMCG00011317 mRNA upstream 80815 18271412 ~ 18272204 (-) True AMCG00011317
AMCG00011330 mRNA upstream 925900 19116497 ~ 19121979 (-) True AMCG00011330
AMCG00011334 mRNA upstream 1009899 19200496 ~ 19208029 (-) True AMCG00011334
AMCG00011333 mRNA upstream 1019225 19209822 ~ 19217839 (-) True AMCG00011333
TU132338 other downstream 180201 17999668 ~ 18000445 (-) True G105793
TU132311 other downstream 429144 17751253 ~ 17751502 (-) True G105770
TU132307 other downstream 447578 17729951 ~ 17733068 (-) False AMCG00011313
TU132119 other downstream 1219577 16958181 ~ 16961069 (-) False AMCG00011290
TU131862 other downstream 2206774 15963338 ~ 15973872 (-) False AMCG00011259
TU132457 other upstream 911696 19102293 ~ 19105269 (-) True G105890
TU132572 other upstream 1219771 19410368 ~ 19413015 (-) False G105970
TU132729 other upstream 1675017 19865614 ~ 19867902 (-) True AMCG00011356
TU133362 other upstream 4862719 23053316 ~ 23060966 (-) True AMCG00011409
TU133710 other upstream 6821608 25012205 ~ 25018332 (-) True AMCG00011445

Expression Profile