RNA id: AMCG00011317


Basic Information

Item Value
RNA id AMCG00011317
length 330
RNA type mRNA
GC content 0.49
exon number 2
gene id AMCG00011317
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 18271412 ~ 18272204 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCCCTCTGGTTGCAAGTCATCTCTCTGCTTGCCCTGCTCCTCTGGTCTACTCCACGCTCGACTGATGCTGCTGCCAGTCAACATCTATGTGGCTCTCACCTGGTTGAAGCACTCTTCCTAGTCTGTGGAGAGAGTGGTTTCTTCTACAACCCCAACAAATCCAAGAGAGAGATGGAGCCAGTATTTGGTGCAAAGACTGCTCAGGACAATGAAGTGGATGAATACCCATTTAAGCAACAAGGAGAAATGAAGGTGAAGAGGGGCATCGTGGAACAGTGCTGTCTCAAACCGTGCACCATATACGAGATGGAAAAATACTGCAACTGA

Function

GO:

id name namespace
GO:0006006 glucose metabolic process biological_process
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG:

id description
K04526 INS; insulin

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU132380 lncRNA downstream 23642 18175668 ~ 18247770 (-) True G105823
TU132399 lncRNA downstream 27267 18240676 ~ 18244145 (-) True G105840
TU132341 lncRNA downstream 238267 18032755 ~ 18033145 (-) True G105795
TU132332 lncRNA downstream 273687 17997438 ~ 17997725 (-) True G105787
TU132331 lncRNA downstream 464483 17806679 ~ 17806929 (-) True G105786
TU132422 lncRNA upstream 344645 18616849 ~ 18617084 (-) True G105859
TU132493 lncRNA upstream 961518 19233722 ~ 19244483 (-) True G105918
TU132565 lncRNA upstream 1104309 19376513 ~ 19376908 (-) True G105967
TU132567 lncRNA upstream 1124589 19396793 ~ 19469364 (-) True G105968
TU132579 lncRNA upstream 1138164 19410368 ~ 19413015 (-) False G105970
AMCG00011318 mRNA downstream 74161 18196541 ~ 18197251 (-) True AMCG00011318
AMCG00011316 mRNA downstream 80815 18180646 ~ 18190597 (-) False AMCG00011316
AMCG00011314 mRNA downstream 477906 17786920 ~ 17793506 (-) True AMCG00011314
AMCG00011315 mRNA downstream 485570 17784040 ~ 17785842 (-) True AMCG00011315
AMCG00011311 mRNA downstream 498247 17761910 ~ 17773165 (-) True AMCG00011311
AMCG00011330 mRNA upstream 844293 19116497 ~ 19121979 (-) True AMCG00011330
AMCG00011334 mRNA upstream 928292 19200496 ~ 19208029 (-) True AMCG00011334
AMCG00011333 mRNA upstream 937618 19209822 ~ 19217839 (-) True AMCG00011333
AMCG00011332 mRNA upstream 975420 19247624 ~ 19261952 (-) True AMCG00011332
AMCG00011336 mRNA upstream 1023880 19296084 ~ 19307708 (-) True AMCG00011336
TU132382 other downstream 80217 18184484 ~ 18191195 (-) True AMCG00011316
TU132383 other downstream 80217 18184484 ~ 18191195 (-) False AMCG00011316
TU132338 other downstream 270967 17999668 ~ 18000445 (-) True G105793
TU132311 other downstream 519910 17751253 ~ 17751502 (-) True G105770
TU132307 other downstream 538344 17729951 ~ 17733068 (-) False AMCG00011313
TU132457 other upstream 830089 19102293 ~ 19105269 (-) True G105890
TU132572 other upstream 1138164 19410368 ~ 19413015 (-) False G105970
TU132729 other upstream 1593410 19865614 ~ 19867902 (-) True AMCG00011356
TU133362 other upstream 4781112 23053316 ~ 23060966 (-) True AMCG00011409
TU133710 other upstream 6740001 25012205 ~ 25018332 (-) True AMCG00011445

Expression Profile