RNA id: AMCG00011318


Basic Information

Item Value
RNA id AMCG00011318
length 711
RNA type mRNA
GC content 0.52
exon number 1
gene id AMCG00011318
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 18196541 ~ 18197251 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGTGAGCCACAGCAAGTCAGTGCCCTTCCTCCCCCCCCCATGCAGTACATCAAGGAATACACTGATGACAATGTGCGCAAAGGCCTTGCTCCCAGACCTCCTCCCCCAATCAAGGACAGCTACATGATGTTTGGCAACCAGTTCCAGTGTGATGAACTCATAATACGCCCTCTGGAAACCCAGGGAATTGAGCGTCTCCACCCAATGCAATTTGATCACAAGAAAGAACTAAAGAAACTTAACATGTCCATTCTGGTGAACTTCCTGGACCTCTTGGACATCTTAATCAAAAGCCCAGGCAGCATTAAGAGAGAGGAGAAGCTGGAAGACTTGAAACTGCTTTTTGTCCACATGCACCATCTAATTAACGAGTACCGGCCACACCAGGCTCGAGAGACACTGCGTGTGATGATGGAGGTGCAGAAGCGGCAGCGTCTTGAGACGGCAGAGCGCTTCCAGAAGCATCTCGAGAGAGTGGTGGAAATGATCCAAGGCTGCCTGGCCTCGCTCCCAGATGACCTGCCCCAGCCGGAGGGAGCCTCAGGGGGTATGCCACGACTGAAAGCTGAGCCCATGGATGTAGACGAGGCAGGCAGCAGCTGCATGATCGGCCAGGTGGACAAAGACAAGGAAACTGCCTTGTTGAAAAAGGACAAAGTGTGGGATAAGGATGCAGCAATGTGCAGCATTATTGACGAAATGACTTAA

Function

GO: NA

KEGG:

id description
K15148 MED7; mediator of RNA polymerase II transcription subunit 7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU132341 lncRNA downstream 163396 18032755 ~ 18033145 (-) True G105795
TU132332 lncRNA downstream 198816 17997438 ~ 17997725 (-) True G105787
TU132331 lncRNA downstream 389612 17806679 ~ 17806929 (-) True G105786
TU132326 lncRNA downstream 396254 17797443 ~ 17800287 (-) True G105782
TU132315 lncRNA downstream 440783 17754327 ~ 17755758 (-) True G105774
TU132399 lncRNA upstream 43425 18240676 ~ 18244145 (-) True G105840
TU132422 lncRNA upstream 419598 18616849 ~ 18617084 (-) True G105859
TU132493 lncRNA upstream 1036471 19233722 ~ 19244483 (-) True G105918
TU132565 lncRNA upstream 1179262 19376513 ~ 19376908 (-) True G105967
TU132567 lncRNA upstream 1199542 19396793 ~ 19469364 (-) True G105968
AMCG00011316 mRNA downstream 5944 18180646 ~ 18190597 (-) False AMCG00011316
AMCG00011314 mRNA downstream 403035 17786920 ~ 17793506 (-) True AMCG00011314
AMCG00011315 mRNA downstream 410699 17784040 ~ 17785842 (-) True AMCG00011315
AMCG00011311 mRNA downstream 423376 17761910 ~ 17773165 (-) True AMCG00011311
AMCG00011313 mRNA downstream 446892 17717626 ~ 17749649 (-) False AMCG00011313
AMCG00011317 mRNA upstream 74161 18271412 ~ 18272204 (-) True AMCG00011317
AMCG00011330 mRNA upstream 919246 19116497 ~ 19121979 (-) True AMCG00011330
AMCG00011334 mRNA upstream 1003245 19200496 ~ 19208029 (-) True AMCG00011334
AMCG00011333 mRNA upstream 1012571 19209822 ~ 19217839 (-) True AMCG00011333
AMCG00011332 mRNA upstream 1050373 19247624 ~ 19261952 (-) True AMCG00011332
TU132382 other downstream 5346 18184484 ~ 18191195 (-) True AMCG00011316
TU132383 other downstream 5346 18184484 ~ 18191195 (-) False AMCG00011316
TU132338 other downstream 196096 17999668 ~ 18000445 (-) True G105793
TU132311 other downstream 445039 17751253 ~ 17751502 (-) True G105770
TU132307 other downstream 463473 17729951 ~ 17733068 (-) False AMCG00011313
TU132457 other upstream 905042 19102293 ~ 19105269 (-) True G105890
TU132572 other upstream 1213117 19410368 ~ 19413015 (-) False G105970
TU132729 other upstream 1668363 19865614 ~ 19867902 (-) True AMCG00011356
TU133362 other upstream 4856065 23053316 ~ 23060966 (-) True AMCG00011409
TU133710 other upstream 6814954 25012205 ~ 25018332 (-) True AMCG00011445

Expression Profile