Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00011338 |
| length | 777 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 4 |
| gene id | AMCG00011338 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 19311307 ~ 19313365 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0009123 | nucleoside monophosphate metabolic process | biological_process |
| GO:0009124 | nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009126 | purine nucleoside monophosphate metabolic process | biological_process |
| GO:0009127 | purine nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009156 | ribonucleoside monophosphate biosynthetic process | biological_process |
| GO:0009161 | ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009167 | purine ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | biological_process |
| GO:1990351 | transporter complex | cellular_component |
| GO:0034702 | ion channel complex | cellular_component |
| GO:0034703 | cation channel complex | cellular_component |
| GO:0034704 | calcium channel complex | cellular_component |
| GO:0005891 | voltage-gated calcium channel complex | cellular_component |
| GO:1902495 | transmembrane transporter complex | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU132421 | lncRNA | upstream | 694242 | 18616850 ~ 18617065 (+) | True | G105858 |
| TU132361 | lncRNA | upstream | 1063539 | 18175355 ~ 18247768 (+) | True | G105811 |
| TU132340 | lncRNA | upstream | 1278282 | 18032755 ~ 18033025 (+) | True | G105794 |
| TU132337 | lncRNA | upstream | 1310964 | 17999636 ~ 18000343 (+) | True | G105792 |
| TU132318 | lncRNA | upstream | 1543086 | 17765891 ~ 17768221 (+) | True | G105776 |
| TU132641 | lncRNA | downstream | 274828 | 19588193 ~ 19588973 (+) | True | G106022 |
| TU132698 | lncRNA | downstream | 489806 | 19803171 ~ 19803475 (+) | True | G106071 |
| TU132775 | lncRNA | downstream | 643640 | 19957005 ~ 19995987 (+) | True | G106134 |
| TU132783 | lncRNA | downstream | 664882 | 19978247 ~ 20014348 (+) | True | G106138 |
| TU132777 | lncRNA | downstream | 673839 | 19987204 ~ 19995987 (+) | False | G106134 |
| AMCG00011344 | mRNA | upstream | 22112 | 19286626 ~ 19289195 (+) | True | AMCG00011344 |
| AMCG00011343 | mRNA | upstream | 32051 | 19268970 ~ 19279256 (+) | True | AMCG00011343 |
| AMCG00011331 | mRNA | upstream | 159578 | 19150482 ~ 19151729 (+) | True | AMCG00011331 |
| AMCG00011328 | mRNA | upstream | 195860 | 19107273 ~ 19115447 (+) | False | AMCG00011328 |
| AMCG00011329 | mRNA | upstream | 220873 | 19054134 ~ 19090434 (+) | True | AMCG00011329 |
| AMCG00011340 | mRNA | downstream | 59082 | 19372447 ~ 19396764 (+) | True | AMCG00011340 |
| AMCG00011337 | mRNA | downstream | 97246 | 19410611 ~ 19414281 (+) | True | AMCG00011337 |
| AMCG00011341 | mRNA | downstream | 109094 | 19422459 ~ 19427557 (+) | True | AMCG00011341 |
| AMCG00011342 | mRNA | downstream | 120963 | 19434328 ~ 19438204 (+) | True | AMCG00011342 |
| AMCG00011339 | mRNA | downstream | 137650 | 19451015 ~ 19475876 (+) | True | AMCG00011339 |
| TU132491 | other | upstream | 88886 | 19222055 ~ 19222421 (+) | True | G105916 |
| TU132460 | other | upstream | 193938 | 19112910 ~ 19117369 (+) | True | AMCG00011328 |
| TU132321 | other | upstream | 1523257 | 17784163 ~ 17788050 (+) | True | G105778 |
| TU132132 | other | upstream | 2329066 | 16978492 ~ 16982241 (+) | True | AMCG00011293 |
| TU131803 | other | upstream | 3327228 | 15963340 ~ 15984079 (+) | True | G105373 |
| TU132810 | other | downstream | 781864 | 20095229 ~ 20162966 (+) | False | G106139 |
| TU132789 | other | downstream | 798715 | 20112080 ~ 20162966 (+) | True | G106139 |
| TU132801 | other | downstream | 805210 | 20118575 ~ 20162966 (+) | False | G106139 |
| TU132823 | other | downstream | 982646 | 20296011 ~ 20339087 (+) | False | AMCG00011365 |
| TU132939 | other | downstream | 1047843 | 20361208 ~ 20367223 (+) | True | G106242 |
