RNA id: AMCG00011369



Basic Information


Item Value
RNA id AMCG00011369
length 252
RNA type mRNA
GC content 0.51
exon number 3
gene id AMCG00011369
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 20434458 ~ 20438919 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atgactgtCATCTCGGAGTGTGTCGCGAGGAATGACAGAGCGCTGTACGGCACTGAGATGAATTGTTACCGTTCCTTCGTGCCTCTCTGTGTCGTTCTTAACCCTTTTCCGTTCTTACACCACCAGATCGGTGTGGAGGAGCTTTCCGCCAATAGCTTCTGGACCAAAGTGAAGGAAGACCGCTATGAGAACAACGAGCTGTTTGCCAAGCTCACCTTGACCTTCGCCTCCCAGACCAAGAGAATCCATTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU132920 lncRNA downstream 158153 20272063 ~ 20276305 (-) True G106224
TU132906 lncRNA downstream 216982 20217251 ~ 20217476 (-) True G106212
TU132870 lncRNA downstream 322248 20071482 ~ 20112210 (-) False G106183
TU132869 lncRNA downstream 339216 20071482 ~ 20095242 (-) False G106183
TU132868 lncRNA downstream 347694 20071482 ~ 20086764 (-) False G106183
TU132972 lncRNA upstream 47352 20486271 ~ 20488188 (-) True G106266
TU132985 lncRNA upstream 176519 20615438 ~ 20615642 (-) True G106278
TU133011 lncRNA upstream 473000 20911919 ~ 20912138 (-) True G106300
TU133063 lncRNA upstream 512841 20951760 ~ 20952855 (-) True G106340
TU133185 lncRNA upstream 1356706 21795625 ~ 21799926 (-) True G106448
AMCG00011367 mRNA downstream 43713 20386164 ~ 20390745 (-) True AMCG00011367
AMCG00011366 mRNA downstream 49809 20376942 ~ 20384649 (-) True AMCG00011366
AMCG00011362 mRNA downstream 521553 19909942 ~ 19912905 (-) True AMCG00011362
AMCG00011356 mRNA downstream 566645 19866119 ~ 19867813 (-) False AMCG00011356
AMCG00011354 mRNA downstream 610306 19817467 ~ 19824152 (-) True AMCG00011354
AMCG00011368 mRNA upstream 1555 20440474 ~ 20477081 (-) True AMCG00011368
AMCG00011370 mRNA upstream 60203 20499122 ~ 20544751 (-) True AMCG00011370
AMCG00011371 mRNA upstream 206584 20645503 ~ 20660607 (-) True AMCG00011371
AMCG00011372 mRNA upstream 275019 20713938 ~ 20728141 (-) True AMCG00011372
AMCG00011375 mRNA upstream 453671 20892590 ~ 20907111 (-) True AMCG00011375
TU132729 other downstream 566556 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 1021443 19410368 ~ 19413015 (-) False G105970
TU132457 other downstream 1329189 19102293 ~ 19105269 (-) True G105890
TU132382 other downstream 2243263 18184484 ~ 18191195 (-) True AMCG00011316
TU133362 other upstream 2614397 23053316 ~ 23060966 (-) True AMCG00011409
TU133710 other upstream 4573286 25012205 ~ 25018332 (-) True AMCG00011445
TU134083 other upstream 6068024 26506943 ~ 26516507 (-) True AMCG00011485
TU134703 other upstream 9186165 29625084 ~ 29625387 (-) True G107713

Expression Profile