RNA id: AMCG00011372


Basic Information

Item Value
RNA id AMCG00011372
length 246
RNA type mRNA
GC content 0.52
exon number 3
gene id AMCG00011372
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 20713938 ~ 20728141 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTGGACGCGACGAAAGACCCCTGTCTGAAGGTGAAATGTCCTCCGCGCAAGGTGTGTGTTACTCATGACTACCAGACAGCCATCTGTATCAACCATAAACAGCTTGTGCACAGtgtacccAGGAGAGGCAGCATGAACCATAAGCACTGGATGGGAACCGCAAACTTCGCCAAGTGTAAATCTTGTCCTGTGACCCATCCCAGCCCTGTCTGTGGCTCAGACGGACACACGTACTCCTCTAAGtta

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
ko05033 Nicotine addiction

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU132985 lncRNA downstream 98296 20615438 ~ 20615642 (-) True G106278
TU132972 lncRNA downstream 225750 20486271 ~ 20488188 (-) True G106266
TU132920 lncRNA downstream 437633 20272063 ~ 20276305 (-) True G106224
TU132906 lncRNA downstream 496462 20217251 ~ 20217476 (-) True G106212
TU132870 lncRNA downstream 601728 20071482 ~ 20112210 (-) False G106183
TU133011 lncRNA upstream 183778 20911919 ~ 20912138 (-) True G106300
TU133063 lncRNA upstream 223619 20951760 ~ 20952855 (-) True G106340
TU133185 lncRNA upstream 1067484 21795625 ~ 21799926 (-) True G106448
TU133190 lncRNA upstream 1146671 21874812 ~ 21875126 (-) True G106453
TU133191 lncRNA upstream 1198712 21926853 ~ 21928367 (-) True G106454
AMCG00011371 mRNA downstream 53331 20645503 ~ 20660607 (-) True AMCG00011371
AMCG00011370 mRNA downstream 169187 20499122 ~ 20544751 (-) True AMCG00011370
AMCG00011368 mRNA downstream 236857 20440474 ~ 20477081 (-) True AMCG00011368
AMCG00011369 mRNA downstream 275019 20434458 ~ 20438919 (-) True AMCG00011369
AMCG00011367 mRNA downstream 323193 20386164 ~ 20390745 (-) True AMCG00011367
AMCG00011375 mRNA upstream 164449 20892590 ~ 20907111 (-) True AMCG00011375
AMCG00011376 mRNA upstream 230723 20958864 ~ 20966129 (-) True AMCG00011376
AMCG00011379 mRNA upstream 248542 20976683 ~ 20977159 (-) True AMCG00011379
AMCG00011378 mRNA upstream 253268 20981409 ~ 20989043 (-) True AMCG00011378
AMCG00011377 mRNA upstream 266311 20994452 ~ 21007340 (-) True AMCG00011377
TU132729 other downstream 846036 19865614 ~ 19867902 (-) True AMCG00011356
TU132572 other downstream 1300923 19410368 ~ 19413015 (-) False G105970
TU132457 other downstream 1608669 19102293 ~ 19105269 (-) True G105890
TU132382 other downstream 2522743 18184484 ~ 18191195 (-) True AMCG00011316
TU133362 other upstream 2325175 23053316 ~ 23060966 (-) True AMCG00011409
TU133710 other upstream 4284064 25012205 ~ 25018332 (-) True AMCG00011445
TU134083 other upstream 5778802 26506943 ~ 26516507 (-) True AMCG00011485
TU134703 other upstream 8896943 29625084 ~ 29625387 (-) True G107713

Expression Profile